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PDBsum entry 3e47

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3e47 calculated with MOLE 2.0 PDB id
3e47
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 1.54 64.0 -2.39 -0.67 30.9 80 3 8 2 3 2 0 0  
2 1.39 2.04 90.8 -1.61 -0.26 21.4 77 12 10 6 6 7 1 1  
3 1.33 1.49 107.9 -1.34 -0.30 17.4 77 9 13 8 8 7 3 0  
4 1.83 1.87 107.9 -1.25 -0.46 16.5 87 9 10 13 10 1 2 0  
5 1.76 3.55 113.8 -2.31 -0.39 27.3 80 11 7 7 7 7 1 0  
6 2.11 2.13 117.7 -2.06 -0.31 26.0 72 12 7 4 9 8 2 0  
7 1.44 1.54 119.1 -2.11 -0.57 27.0 84 10 10 4 3 2 1 0  
8 1.40 2.03 128.4 -1.89 -0.40 23.7 79 14 11 8 5 9 1 1  
9 1.34 1.39 134.4 -2.16 -0.38 25.8 81 18 10 11 7 6 1 1  
10 1.78 3.08 155.5 -2.70 -0.46 30.9 78 21 13 7 4 10 2 0  
11 1.32 4.08 160.1 -2.13 -0.31 26.2 79 15 9 9 8 10 1 0  
12 1.91 2.32 167.5 -2.29 -0.44 25.1 82 15 11 10 5 9 0 0  
13 1.68 2.30 177.0 -2.11 -0.37 22.2 81 19 8 11 8 8 1 1  
14 1.56 1.51 183.5 -2.15 -0.54 25.1 85 19 14 13 6 7 1 0  
15 1.36 1.50 210.7 -2.18 -0.39 23.8 84 26 11 18 9 6 1 1  
16 1.33 1.35 210.7 -2.73 -0.51 27.4 84 22 11 16 7 7 0 0  
17 1.45 2.02 214.9 -2.08 -0.42 22.9 83 23 14 16 7 8 1 1  
18 1.29 1.32 213.7 -2.43 -0.41 25.5 86 21 9 18 9 6 1 0  
19 1.32 1.35 217.6 -2.30 -0.37 24.8 81 22 9 16 11 7 2 0  
20 1.95 1.96 215.2 -2.54 -0.52 26.4 84 20 13 15 6 8 0 0  
21 1.78 3.67 217.9 -2.28 -0.45 24.8 84 18 12 16 7 8 1 0  
22 1.87 2.58 222.2 -1.81 -0.25 20.1 79 21 8 15 12 12 2 0  
23 1.95 1.95 221.8 -2.12 -0.40 23.9 80 19 12 14 10 9 2 0  
24 1.54 1.49 246.3 -2.42 -0.52 26.0 84 28 12 15 8 7 1 0  
25 1.27 1.29 251.2 -2.48 -0.48 26.2 86 26 14 22 12 4 0 0  
26 1.22 1.57 255.4 -2.32 -0.49 25.4 85 23 17 20 11 6 0 0  
27 1.71 3.80 274.2 -2.37 -0.46 26.6 83 25 16 18 9 11 1 0  
28 1.31 1.31 272.7 -2.85 -0.53 30.3 84 36 16 19 7 7 2 0  
29 1.42 1.47 277.4 -2.53 -0.49 26.4 86 29 14 21 8 8 0 0  
30 1.83 1.98 276.9 -2.71 -0.54 29.5 83 33 19 17 5 9 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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