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PDBsum entry 3e3y

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 3e3y calculated with MOLE 2.0 PDB id
3e3y
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.32 52.2 -0.58 -0.43 6.7 68 2 2 3 1 5 0 0  DA 8 E DC 10 E DC 11 E DG 12 E DG 13 E DC 14 E DG
4 F DG 5 F DT 6 F DT 7 F DA 8 F DC 10 F
2 2.31 2.32 94.1 -1.25 -0.53 13.7 79 2 5 6 5 4 0 0  DA 8 E DC 10 E DC 11 E DG 12 E DG 1 F DC 2 F DC 3
F DA 8 F DC 10 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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