PDBsum entry 3e3q Go to PDB code:  Pore analysis for: 3e3q calculated with MOLE 2.0 PDB id 3e3q Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.95 2.25 36.7 -1.44 -0.64 23.0 88 4 4 4 4 0 0 0   2 2.05 3.31 56.3 -1.74 -0.32 28.6 79 9 8 3 6 2 1 0   3 2.08 3.31 62.5 -2.16 -0.70 29.7 81 5 9 2 4 0 0 0   4 2.05 3.33 63.4 -2.04 -0.69 28.4 81 5 10 2 4 0 0 0   5 3.04 4.75 73.6 -2.29 -0.41 35.4 80 9 11 2 3 2 1 0   6 1.26 1.48 85.2 -1.65 -0.30 20.5 81 8 9 4 4 4 2 0   7 1.96 2.23 87.2 -1.84 -0.60 23.2 82 8 8 7 4 3 2 0   8 1.29 1.39 116.0 -1.62 -0.32 24.7 79 11 9 8 7 6 3 0   9 2.08 3.96 114.6 -2.25 -0.72 29.9 85 8 12 6 4 0 0 0   10 2.61 3.00 138.9 -1.61 -0.41 17.0 82 10 7 10 8 5 1 0   11 1.42 2.90 140.3 -1.56 -0.57 17.9 84 8 9 7 7 2 0 0   12 1.82 2.01 152.3 -1.71 -0.46 24.6 80 16 13 10 9 4 3 0   13 1.82 2.00 169.6 -1.99 -0.50 28.8 82 16 16 10 6 4 3 0   14 2.01 3.33 175.5 -2.24 -0.70 29.2 78 10 20 6 5 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.