spacer
spacer

PDBsum entry 3e2p

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3e2p calculated with MOLE 2.0 PDB id
3e2p
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 3.16 96.8 -2.25 -0.48 28.7 82 15 12 8 3 4 4 0  
2 1.24 2.20 121.8 -2.30 -0.50 29.6 84 17 14 13 4 5 3 0  
3 1.18 1.30 132.6 -2.01 -0.68 26.1 86 18 18 10 5 3 2 0  SO4 307 L
4 1.19 2.57 19.2 0.41 0.33 19.2 75 2 2 0 6 0 0 0  
5 1.16 1.35 15.7 -0.63 -0.11 21.9 76 1 2 1 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer