spacer
spacer

PDBsum entry 3e1e

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 3e1e calculated with MOLE 2.0 PDB id
3e1e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.73 29.6 -0.30 -0.45 4.3 91 2 0 2 3 2 0 0  
2 1.29 1.59 30.8 -1.19 -0.65 12.5 92 3 4 1 1 1 0 0  
3 1.35 1.78 30.9 -1.05 -0.66 10.8 92 3 4 2 2 1 0 0  
4 1.34 1.53 49.4 -1.79 -0.65 18.7 90 4 6 1 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer