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PDBsum entry 3dx7

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Immune system PDB id
3dx7
Contents
Protein chains
276 a.a.
99 a.a.
Ligands
GLU-GLU-ASN-LEU-
LEU-ASP-PHE-VAL-
ARG-PHE
ACT ×4
GOL ×2
Waters ×401

References listed in PDB file
Key reference
Title Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.
Authors J.K.Archbold, W.A.Macdonald, S.Gras, L.K.Ely, J.J.Miles, M.J.Bell, R.M.Brennan, T.Beddoe, M.C.Wilce, C.S.Clements, A.W.Purcell, J.Mccluskey, S.R.Burrows, J.Rossjohn.
Ref. J Exp Med, 2009, 206, 209-219.
PubMed id 19139173
Abstract
Human leukocyte antigen (HLA) gene polymorphism plays a critical role in protective immunity, disease susceptibility, autoimmunity, and drug hypersensitivity, yet the basis of how HLA polymorphism influences T cell receptor (TCR) recognition is unclear. We examined how a natural micropolymorphism in HLA-B44, an important and large HLA allelic family, affected antigen recognition. T cell-mediated immunity to an Epstein-Barr virus determinant (EENLLDFVRF) is enhanced when HLA-B*4405 was the presenting allotype compared with HLA-B*4402 or HLA-B*4403, each of which differ by just one amino acid. The micropolymorphism in these HLA-B44 allotypes altered the mode of binding and dynamics of the bound viral epitope. The structure of the TCR-HLA-B*4405(EENLLDFVRF) complex revealed that peptide flexibility was a critical parameter in enabling preferential engagement with HLA-B*4405 in comparison to HLA-B*4402/03. Accordingly, major histocompatibility complex (MHC) polymorphism can alter the dynamics of the peptide-MHC landscape, resulting in fine-tuning of T cell responses between closely related allotypes.
PROCHECK
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 Headers

 

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