PDBsum entry 3dv1 Go to PDB code:  Pore analysis for: 3dv1 calculated with MOLE 2.0 PDB id 3dv1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.65 36.3 -1.53 -0.57 11.3 84 4 1 5 2 2 0 0   2 1.43 1.66 43.6 -1.42 -0.61 8.9 85 5 0 6 4 1 0 0   3 1.76 1.83 43.7 -2.01 -0.48 21.6 82 9 1 2 0 3 0 0   4 1.42 1.52 52.8 -1.74 -0.34 18.8 81 5 2 6 2 4 0 0   5 1.71 1.71 73.1 -1.32 -0.48 14.7 83 7 3 2 3 4 2 0  AR9 501 A 6 1.78 1.78 114.6 -1.36 -0.32 15.0 78 10 4 5 4 9 2 0  AR9 501 A 7 1.75 1.74 119.7 -1.27 -0.36 15.7 79 9 5 3 4 8 2 0  AR9 501 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.