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PDBsum entry 3dp0

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3dp0 calculated with MOLE 2.0 PDB id
3dp0
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.14 2.82 42.7 -1.82 -0.23 31.0 80 4 4 1 2 2 1 0  
2 1.20 1.33 50.5 -0.34 -0.03 11.5 75 6 2 2 4 4 3 0  CL 160 F
3 1.21 1.81 55.5 0.43 0.24 8.6 81 4 1 3 8 3 1 0  
4 2.04 3.27 56.9 -2.49 -0.27 19.2 77 8 3 3 2 2 4 0  2BC 162 B
5 2.31 4.84 73.4 -2.95 -0.69 16.6 84 5 8 12 0 0 6 0  
6 1.25 1.33 80.8 0.23 0.26 10.8 79 5 4 1 11 7 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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