PDBsum entry 3djc Go to PDB code:  Pore analysis for: 3djc calculated with MOLE 2.0 PDB id 3djc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.11 4.06 54.2 -1.00 -0.33 12.3 86 6 3 8 3 2 2 0   2 2.20 2.66 54.8 -0.75 -0.29 11.1 89 7 4 5 7 0 2 0   3 3.31 3.31 56.9 -0.79 0.05 19.1 85 4 4 4 7 1 1 0   4 3.12 4.05 60.3 -2.00 -0.27 25.8 81 10 3 5 3 2 1 0   5 3.12 4.06 66.5 -1.52 -0.21 23.1 84 10 4 5 4 2 1 0   6 3.82 5.96 69.0 -1.21 -0.40 15.9 86 10 4 9 7 0 3 0   7 3.85 5.63 69.2 -1.04 -0.41 15.0 88 7 4 7 8 0 2 0  GOL 265 J 8 3.85 5.93 69.4 -0.84 -0.30 13.4 87 7 4 6 7 0 2 0  GOL 265 J 9 1.15 1.44 73.3 -0.77 -0.27 18.2 90 8 7 8 8 2 1 0  GOL 265 J 10 1.93 3.30 73.3 -1.25 -0.16 23.3 85 14 4 8 5 5 0 0   11 1.18 1.44 73.5 -0.71 -0.22 17.6 89 8 7 7 7 2 1 0  GOL 265 J 12 3.85 3.86 73.7 -1.12 -0.34 14.7 88 8 4 9 6 0 3 0  GOL 265 J 13 3.85 3.86 74.0 -1.33 -0.38 16.4 86 8 4 8 5 0 3 0   14 1.89 3.43 76.3 -0.82 -0.22 16.8 88 11 5 11 6 3 2 0   15 2.92 3.93 79.3 -0.91 -0.24 12.2 85 7 3 6 7 1 3 0   16 1.28 1.44 82.3 -0.93 -0.26 19.4 88 10 7 8 7 2 1 0   17 2.23 2.51 84.9 -1.06 -0.43 13.8 89 10 6 11 6 1 2 0   18 2.22 2.53 90.6 -0.82 -0.21 16.8 85 10 6 9 7 2 2 0   19 1.84 3.42 92.4 -1.21 -0.24 22.6 85 17 5 9 8 3 1 0   20 0.80 2.75 95.9 -1.04 -0.32 15.0 84 11 5 9 5 3 3 0   21 2.23 2.44 102.9 -0.75 -0.26 16.4 89 8 7 11 11 0 3 0   22 2.22 2.44 105.6 -1.34 -0.26 21.5 87 14 5 10 7 2 2 0   23 2.71 3.18 108.2 -2.56 -0.45 26.1 86 18 4 14 3 3 0 0   24 3.46 4.19 110.5 -0.82 -0.33 10.9 88 9 6 11 9 1 4 0   25 1.82 3.34 117.1 -1.48 -0.27 25.2 86 19 8 10 10 3 2 0   26 2.73 3.05 127.3 -2.31 -0.48 25.3 86 21 5 15 6 1 1 0   27 3.14 3.91 131.2 -1.13 -0.23 17.4 87 13 5 10 10 2 4 0   28 1.35 1.54 139.9 -2.04 -0.38 26.5 86 25 8 16 6 3 0 0   29 2.01 3.28 142.7 -1.29 -0.25 21.7 86 18 8 10 13 3 4 0   30 0.80 2.75 182.7 -1.20 -0.29 16.9 85 21 8 15 12 5 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.