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PDBsum entry 3dfs

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3dfs calculated with MOLE 2.0 PDB id
3dfs
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.47 124.7 -1.09 -0.20 21.1 87 21 7 4 15 2 1 0  
2 1.26 1.36 182.0 -1.40 -0.30 22.1 85 27 12 7 16 2 3 0  13P 3001 A
3 1.24 1.38 191.2 -0.77 -0.25 12.3 81 15 8 18 23 5 6 0  
4 1.22 1.45 208.1 -1.32 -0.29 21.2 88 24 9 11 19 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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