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PDBsum entry 3dds

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3dds calculated with MOLE 2.0 PDB id
3dds
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.56 1.56 30.7 -1.71 -0.39 24.4 81 4 4 1 3 0 1 0  
2 1.40 1.90 36.2 -0.92 -0.09 24.5 85 2 6 1 6 0 1 0  
3 1.82 1.82 42.8 -1.94 -0.61 23.8 71 1 3 1 0 2 0 0  CFF 903 B
4 1.62 2.23 37.6 -1.93 -0.16 30.2 81 8 3 1 1 3 1 0  
5 1.54 2.80 48.0 -1.60 -0.32 25.0 76 6 4 2 2 5 1 0  
6 1.54 2.80 48.2 -1.87 -0.22 29.4 81 8 3 1 1 4 0 0  
7 2.33 2.33 43.0 -2.73 -0.67 37.8 84 5 6 2 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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