PDBsum entry 3dbr Go to PDB code:  Pore analysis for: 3dbr calculated with MOLE 2.0 PDB id 3dbr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 34 pores, coloured by radius 34 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 1.54 37.3 -0.54 -0.65 4.8 94 1 1 7 4 0 0 0   2 1.66 2.23 47.0 -1.71 -0.55 21.2 81 4 5 3 4 1 3 0   3 1.78 2.02 48.1 -1.39 -0.49 17.1 85 6 3 5 3 0 2 0   4 2.23 3.78 48.8 -2.79 -0.64 33.0 82 7 8 4 1 2 0 0   5 2.88 2.86 54.8 -1.57 -0.44 23.3 75 6 6 1 6 2 2 0   6 1.80 2.02 63.0 -1.40 -0.54 17.3 84 6 7 7 4 0 3 0   7 2.86 2.86 69.8 -1.46 -0.49 21.4 76 5 10 3 7 2 3 0   8 2.09 2.08 78.6 -2.89 -0.77 30.6 82 4 6 7 2 0 2 0   9 1.66 2.53 88.7 -1.56 -0.49 19.1 82 11 7 9 8 1 5 0   10 1.59 1.58 87.8 -1.83 -0.46 25.2 79 6 6 3 6 2 1 0   11 1.57 1.57 91.6 -1.49 -0.39 20.4 90 10 2 8 4 0 0 0   12 2.71 2.74 92.8 -1.71 -0.45 19.2 83 6 13 9 4 2 3 0   13 1.51 2.65 95.4 -1.62 -0.47 22.1 77 11 10 5 11 3 5 0   14 2.74 2.76 97.6 -0.70 -0.37 14.1 88 5 7 8 8 1 3 0   15 1.89 3.36 108.5 -1.20 -0.36 19.7 83 4 7 5 6 1 2 0   16 1.62 1.57 112.9 -1.62 -0.47 21.8 81 11 7 6 10 1 4 0   17 1.49 2.55 113.3 -1.91 -0.50 21.3 83 10 12 11 8 2 4 0   18 1.82 1.97 114.3 -2.60 -0.62 30.8 86 11 10 10 2 0 1 0   19 1.68 2.47 118.0 -1.24 -0.44 18.0 86 9 6 10 12 1 4 0   20 2.03 2.03 122.0 -2.24 -0.66 27.8 81 10 15 8 5 0 3 0   21 1.56 1.56 121.5 -1.51 -0.57 19.0 84 7 9 10 7 1 3 0   22 1.58 1.56 138.9 -2.53 -0.69 30.0 85 10 8 8 3 0 1 0   23 1.57 1.52 146.9 -1.77 -0.47 22.0 85 12 11 9 7 2 1 0   24 1.56 1.53 151.7 -1.05 -0.40 18.5 89 11 5 8 11 1 1 0   25 2.63 5.40 154.4 -1.75 -0.46 20.1 85 7 11 12 6 1 3 0   26 2.70 2.78 276.5 -1.56 -0.43 20.6 88 19 14 20 15 2 3 0   27 2.03 2.06 28.9 -2.77 -0.73 24.1 78 4 3 4 1 1 2 0   28 2.05 2.41 31.6 0.15 0.16 9.0 73 2 1 2 4 3 1 0   29 2.30 2.30 37.9 -1.42 -0.46 16.5 87 4 4 4 4 0 1 0   30 1.66 2.84 49.2 -1.98 -0.52 19.0 77 4 8 5 3 2 4 0   31 1.30 1.57 55.0 -2.34 -0.73 13.4 81 2 1 3 1 1 0 1   32 3.51 3.73 67.6 -1.74 -0.54 17.6 80 7 7 8 4 0 4 0   33 1.66 2.85 69.6 -1.63 -0.47 22.3 83 6 8 5 5 1 2 0   34 2.92 3.80 107.2 -1.00 -0.35 14.6 91 8 5 9 9 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.