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PDBsum entry 3d5c

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 3d5c calculated with MOLE 2.0 PDB id
3d5c
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.93 1.93 109.3 -0.91 -0.63 11.3 80 7 2 3 5 2 0 0  C 136 A i:B A 949 A U 950 A G 951 A U 952 A G 953
A G 954 A U 955 A U 961 A C 962 A G 963 A A 964 A
A 965 A A 974 A A 977 A C 1223 A G 1224 A U 1307
A G 1311 A G 1312 A C 1320 A C 1321 A G 1323 A A
1324 A C 1325 A A 1363 A MG 1672 A MG 1698 A MG
1884 A MG 1892 A MG 1898 A G 29 Y
2 1.52 1.52 131.3 -1.09 -0.75 11.6 81 7 1 2 0 0 1 0  U 5 A G 6 A A 26 A G 27 A G 28 A G 29 A MG 205 A
U 296 A G 297 A G 299 A G 406 A G 428 A A 430 A A
431 A A 432 A C 433 A U 434 A C 435 A MG 473 A A
495 A A 498 A G 500 A C 501 A G 502 A C 503 A C
504 A C 508 A A 509 A C 522 A A 523 A G 524 A C
536 A G 537 A G 540 A G 541 A G 542 A C 549 A G
550 A U 551 A A 611 A C 612 A G 630 A MG 1593 A
MG 1613 A MG 1653 A MG 1660 A MG 1680 A MG 1691 A
MG 1790 A MG 1914 A
3 1.33 1.35 131.9 -0.86 -0.36 16.9 76 9 8 4 12 3 3 0  G 953 A G 954 A U 955 A U 956 A U 957 A A 958 A A
959 A U 960 A G 963 A A 964 A A 965 A C 985 A A
986 A MG 1698 A MG 1884 A G 29 Y
4 1.79 1.78 143.9 -0.62 -0.70 6.9 80 4 1 2 3 2 0 0  C 924 A G 933 A C 934 A A 935 A G 953 A G 954 A U
955 A A 965 A G 966 A C 967 A A 968 A C 1063 A G
1064 A U 1065 A C 1066 A A 1111 A C 1112 A C 1113
A C 1114 A C 1115 A C 1116 A G 1117 A C 1118 A C
1119 A G 1120 A A 1130 A G 1131 A C 1132 A G 1133
A A 1146 A C 1147 A U 1148 A C 1149 A U 1150 A A
1151 A C 1153 A G 1154 A G 1155 A G 1156 A A 1183
A G 1184 A G 1185 A G 1186 A G 1187 A A 1188 A C
1189 A C 1195 A G 1343 A C 1344 A U 1345 A G 1385
A G 1386 A C 1399 A C 1400 A MG 1928 A G 29 Y C
34 Y A 35 Y U 36 Y
5 2.18 2.18 153.5 -0.45 -0.40 7.1 79 5 0 0 4 3 2 0  U 677 A U 678 A C 679 A C 680 A G 690 A G 691 A G
693 A C 699 A G 700 A U 705 A A 706 A G 799 A G
800 A C 924 A G 925 A G 926 A G 928 A G 929 A C
931 A G 953 A G 954 A U 955 A A 965 A G 966 A C
967 A C 1195 A U 1381 A C 1382 A C 1383 A G 1385
A G 1386 A C 1399 A C 1400 A MG 1775 A MG 1830 A
MG 1891 A MG 1911 A A 12 V A 13 V G 29 Y C 34 Y A
35 Y U 36 Y
6 1.25 1.25 155.7 -0.66 -0.77 6.3 80 3 0 1 0 0 1 0  A 26 A G 27 A G 28 A G 29 A C 40 A G 41 A G 394 A
C 395 A G 396 A A 397 A C 398 A G 399 A C 400 A C
401 A G 406 A G 428 A A 430 A A 431 A A 432 A C
433 A U 434 A C 435 A C 442 A C 443 A C 444 A G
445 A G 446 A G 447 A MG 460 A MG 473 A G 485 A U
486 A A 487 A A 495 A A 498 A G 500 A C 501 A G
502 A C 503 A C 504 A C 508 A A 509 A C 522 A A
523 A G 524 A C 536 A G 537 A G 540 A G 541 A G
542 A G 548 A C 549 A G 550 A U 551 A MG 1593 A
MG 1613 A MG 1653 A MG 1680 A MG 1691 A MG 1714 A
MG 1790 A MG 1818 A MG 1912 A MG 1914 A
7 2.85 2.85 161.1 -0.55 -0.79 5.4 85 1 2 1 0 0 1 0  A 572 A U 723 A G 724 A G 727 A A 729 A G 731 A G
818 A A 819 A C 822 A G 823 A C 824 A G 825 A C
826 A U 827 A G 851 A G 852 A G 853 A G 854 A G
855 A C 856 A C 857 A C 866 A G 867 A C 868 A U
870 A U 871 A A 872 A G 886 A G 887 A A 915 A G
916 A G 917 A A 918 A A 919 A G 1392 A U 1393 A A
1394 A C 1403 A C 1404 A C 1490 A G 1491 A A 1493
A G 1494 A U 1495 A C 1496 A U 1498 A U 1510 A U
1528 A G 1529 A G 1530 A MG 1589 A MG 1853 A MG
1934 A U 17 V G 18 V U 19 V G 26 Y U 27 Y C 28 Y
A 37 Y
8 1.33 1.33 173.2 -0.84 -0.69 11.8 82 5 3 1 3 1 0 0  G 406 A G 416 A C 417 A C 418 A C 419 A C 422 A A
430 A A 431 A A 432 A C 433 A U 434 A C 435 A A
495 A A 498 A G 500 A C 514 A G 515 A U 516 A U
531 A G 538 A A 539 A G 540 A G 953 A G 954 A U
955 A G 963 A A 964 A A 965 A C 985 A G 1050 A C
1051 A G 1207 A C 1208 A C 1209 A C 1214 A MG
1613 A MG 1691 A MG 1698 A G 29 Y
9 1.32 1.34 172.1 -1.09 -0.48 16.7 78 12 9 5 9 3 3 0  C 136 A i:B A 949 A U 950 A G 951 A U 952 A G 953
A G 954 A U 955 A U 956 A U 957 A A 958 A A 959 A
U 960 A U 961 A C 962 A A 974 A A 977 A C 985 A A
986 A C 1223 A G 1224 A U 1307 A G 1311 A G 1312
A C 1320 A C 1321 A G 1323 A A 1324 A C 1325 A A
1363 A MG 1672 A MG 1884 A MG 1898 A
10 2.77 2.76 170.9 -0.61 -0.76 6.2 77 4 2 1 1 0 2 0  U 5 A MG 211 A G 238 A U 239 A C 240 A C 241 A C
242 A A 243 A G 281 A G 292 A G 293 A G 299 A A
300 A G 301 A G 302 A A 572 A A 574 A G 575 A G
576 A G 577 A G 610 A A 611 A C 612 A G 630 A G
631 A A 632 A A 759 A G 760 A A 814 A A 815 A G
881 A C 882 A G 886 A G 887 A G 890 A U 905 A G
906 A A 915 A G 916 A C 1403 A C 1404 A C 1490 A
G 1491 A A 1493 A G 1494 A U 1495 A C 1496 A U
1498 A U 1510 A MG 1551 A MG 1568 A MG 1589 A MG
1608 A MG 1660 A MG 1665 A MG 1854 A MG 1876 A MG
1934 A U 17 V G 18 V U 19 V G 26 Y U 27 Y C 28 Y
A 37 Y
11 2.23 2.21 197.4 -0.57 -0.79 5.5 89 2 2 2 0 0 1 0  A 572 A A 665 A U 669 A G 670 A G 671 A U 672 A G
713 A G 714 A A 715 A A 716 A C 717 A U 723 A C
732 A A 733 A C 738 A C 805 A C 806 A G 818 A A
819 A G 855 A C 856 A C 857 A C 866 A G 867 A C
868 A G 886 A G 887 A A 915 A G 916 A G 917 A A
918 A A 919 A G 1392 A U 1393 A A 1394 A C 1403 A
C 1404 A C 1490 A G 1491 A A 1493 A G 1494 A U
1495 A C 1496 A U 1498 A U 1510 A G 1525 A G 1526
A C 1527 A U 1528 A G 1529 A G 1530 A A 1531 A MG
1589 A MG 1845 A MG 1853 A MG 1934 A U 17 V G 18
V U 19 V G 26 Y U 27 Y C 28 Y A 37 Y
12 1.20 1.35 208.7 -1.30 -0.68 14.1 83 14 3 5 2 2 0 0  C 136 A i:B C 136 A i:A A 949 A G 976 A A 1123 A
G 1124 A U 1125 A A 1130 A G 1131 A C 1132 A C
1141 A G 1142 A G 1143 A G 1144 A C 1145 A A 1146
A G 1255 A A 1256 A U 1257 A G 1258 A C 1259 A C
1260 A C 1277 A U 1278 A A 1279 A U 1281 A C 1284
A U 1307 A G 1311 A G 1312 A C 1320 A C 1321 A G
1323 A A 1324 A C 1325 A G 1356 A C 1359 A G 1361
A A 1363 A U 1364 A MG 1654 A MG 1669 A MG 1672 A
MG 1856 A MG 1874 A MG 1924 A
13 2.05 2.21 203.8 -0.81 -0.55 10.7 82 12 0 2 5 1 2 0  A 50 A G 52 A A 116 A G 117 A U 118 A A 119 A G
190 A U 252 A G 257 A G 258 A G 259 A C 268 A C
269 A U 287 A A 288 A G 317 A G 318 A G 319 A C
320 A A 321 A A 909 A C 910 A A 1408 A C 1409 A G
1410 A C 1411 A C 1412 A A 1413 A U 1414 A G 1423
A C 1424 A U 1425 A C 1426 A U 1436 A C 1437 A G
1438 A C 1439 A C 1465 A C 1466 A G 1467 A A 1468
A C 1479 A G 1480 A G 1494 A U 1495 A C 1496 A MG
1701 A MG 1726 A MG 357 X MG 360 X MG 361 X G 26
Y U 27 Y C 28 Y
14 1.49 1.49 207.1 -0.67 -0.77 7.0 81 3 2 1 0 0 1 0  C 23 A U 24 A C 25 A A 26 A G 27 A G 28 A G 29 A
C 40 A G 41 A G 394 A C 395 A G 396 A A 397 A C
398 A G 399 A C 400 A C 401 A C 442 A C 443 A C
444 A G 445 A G 446 A G 447 A MG 460 A G 485 A U
486 A A 487 A G 548 A C 549 A G 550 A U 551 A C
554 A C 555 A G 557 A A 572 A A 574 A U 884 A G
885 A G 886 A G 887 A G 888 A A 889 A G 890 A A
907 A A 908 A A 909 A U 911 A C 912 A A 915 A G
916 A C 1403 A C 1404 A C 1490 A G 1491 A A 1493
A G 1494 A U 1495 A C 1496 A U 1498 A U 1510 A MG
1586 A MG 1589 A MG 1593 A MG 1647 A MG 1680 A MG
1693 A MG 1714 A MG 1818 A MG 1912 A MG 1934 A U
17 V G 18 V U 19 V G 26 Y U 27 Y C 28 Y A 37 Y
15 1.78 1.78 207.2 -0.66 -0.59 8.3 82 9 0 2 4 1 2 0  A 50 A G 52 A A 53 A C 54 A A 55 A U 56 A C 58 A
A 59 A A 116 A G 117 A U 118 A A 119 A A 120 A G
122 A U 252 A C 267 A C 268 A U 287 A A 288 A C
314 A A 315 A G 316 A G 317 A G 318 A G 319 A C
320 A C 328 A A 329 A C 330 A G 331 A G 333 A C
334 A C 339 A U 340 A C 341 A A 349 A G 350 A G
351 A C 352 A U 359 A A 909 A C 910 A A 1408 A C
1409 A G 1410 A C 1411 A C 1412 A A 1413 A U 1414
A G 1423 A C 1424 A U 1425 A C 1426 A C 1479 A G
1480 A G 1494 A U 1495 A C 1496 A MG 1701 A MG
1726 A MG 1918 A MG 357 X MG 360 X MG 361 X G 26
Y U 27 Y C 28 Y
16 1.43 1.43 220.2 -0.94 -0.48 10.7 78 13 1 4 4 6 2 0  MG 70 A C 136 A i:B U 677 A U 678 A C 679 A C 680
A G 690 A G 691 A G 693 A C 699 A G 700 A U 705 A
A 706 A G 799 A G 800 A G 929 A A 937 A A 938 A C
940 A G 941 A G 942 A A 949 A C 1234 A U 1235 A A
1236 A C 1237 A A 1238 A U 1307 A G 1311 A G 1312
A C 1320 A C 1321 A G 1323 A A 1324 A C 1325 A C
1336 A G 1337 A U 1341 A U 1351 A C 1352 A G 1353
A C 1354 A G 1355 A G 1356 A A 1363 A U 1364 A G
1365 A C 1366 A G 1379 A U 1380 A U 1381 A MG
1619 A MG 1654 A MG 1672 A MG 1720 A MG 1752 A MG
1762 A MG 1775 A MG 1808 A MG 1813 A MG 1870 A A
12 V A 13 V G 31 Z C 32 Z U 33 Z
17 1.97 1.97 224.0 -0.58 -0.73 6.3 84 6 1 2 3 2 0 0  C 136 A i:B U 723 A G 724 A G 727 A A 729 A G 731
A G 818 A A 819 A C 822 A G 823 A C 824 A G 825 A
C 826 A U 827 A G 851 A G 852 A G 853 A G 854 A G
855 A C 856 A C 857 A C 866 A G 867 A C 868 A U
870 A U 871 A A 872 A A 919 A U 920 A U 921 A G
922 A A 923 A C 924 A A 949 A U 950 A G 951 A U
952 A G 953 A G 954 A U 955 A U 961 A C 962 A G
963 A A 964 A A 965 A G 966 A C 967 A A 974 A A
977 A U 1194 A C 1195 A U 1196 A G 1197 A G 1198
A C 1223 A G 1224 A U 1307 A G 1311 A G 1312 A C
1320 A C 1321 A G 1323 A A 1324 A C 1325 A A 1363
A G 1386 A G 1387 A C 1388 A C 1389 A U 1390 A U
1391 A G 1392 A U 1393 A C 1399 A C 1400 A U 1528
A G 1529 A MG 1672 A MG 1698 A MG 1828 A MG 1853
A MG 1884 A MG 1892 A MG 1898 A MG 1921 A
18 1.86 1.86 222.2 -1.73 -0.59 18.6 77 17 7 6 2 4 1 0  MG 463 A G 568 A C 569 A G 821 A C 822 A G 823 A
C 824 A G 825 A C 826 A U 827 A G 851 A G 852 A G
861 A C 862 A U 870 A U 871 A A 872 A A 873 A G
874 A C 875 A G 876 A C 877 A C 879 A G 1072 A U
1073 A A 1105 A G 1106 A A 1110 A A 1111 A C 1112
A C 1113 A C 1114 A C 1115 A C 1116 A G 1117 A C
1118 A C 1119 A G 1120 A A 1130 A G 1131 A C 1132
A G 1133 A A 1146 A C 1147 A U 1148 A C 1149 A U
1150 A A 1151 A C 1153 A G 1154 A G 1155 A G 1156
A C 1158 A MG 1625 A MG 1835 A MG 1928 A
19 1.78 1.78 223.6 -1.64 -0.54 19.1 78 22 8 6 5 4 2 0  U 5 A G 299 A A 300 A C 564 A U 565 A G 567 A G
568 A G 630 A G 861 A C 862 A C 875 A G 876 A C
877 A G 1072 A U 1073 A A 1105 A G 1106 A A 1110
A A 1111 A C 1112 A C 1113 A C 1114 A C 1115 A C
1116 A G 1117 A C 1118 A C 1119 A G 1120 A A 1130
A G 1131 A C 1132 A G 1133 A A 1146 A C 1147 A U
1148 A C 1149 A U 1150 A A 1151 A C 1153 A G 1154
A G 1155 A G 1156 A C 1158 A MG 1835 A MG 1928 A
20 1.34 1.37 225.8 -0.78 -0.50 13.0 76 9 7 2 8 3 3 0  G 406 A G 416 A C 417 A C 418 A C 419 A U 420 A C
422 A A 430 A A 431 A A 432 A C 433 A U 434 A C
435 A A 495 A A 498 A G 500 A C 514 A G 515 A U
516 A U 531 A G 538 A A 539 A G 540 A A 958 A A
959 A C 985 A A 986 A G 1207 A C 1208 A C 1209 A
C 1214 A MG 1613 A MG 1691 A
21 1.35 1.36 226.7 -0.81 -0.51 13.1 79 15 8 3 12 3 3 0  U 5 A G 6 A G 7 A A 8 A G 9 A A 10 A G 11 A A 26
A MG 205 A G 297 A A 298 A G 299 A G 506 A C 507
A C 508 A U 512 A C 513 A C 514 A G 515 A U 516 A
U 531 A A 532 A A 533 A U 534 A G 557 A A 611 A C
612 A G 630 A A 958 A A 959 A C 985 A A 986 A G
1207 A C 1208 A C 1209 A C 1214 A MG 1612 A MG
1660 A
22 1.77 1.77 236.9 -1.08 -0.45 12.1 78 10 2 2 6 5 3 0  U 677 A U 678 A C 679 A C 680 A G 690 A G 691 A G
693 A C 699 A G 700 A U 705 A A 706 A G 799 A G
800 A G 929 A C 930 A G 933 A C 934 A U 1065 A C
1066 A A 1111 A C 1112 A C 1113 A C 1114 A C 1115
A C 1116 A G 1117 A C 1118 A C 1119 A G 1120 A A
1130 A G 1131 A C 1132 A G 1133 A A 1146 A C 1147
A U 1148 A C 1149 A U 1150 A A 1151 A C 1153 A G
1154 A G 1155 A G 1156 A G 1175 A G 1181 A G 1182
A A 1183 A G 1184 A G 1185 A G 1186 A G 1187 A A
1188 A C 1189 A A 1346 A C 1378 A G 1379 A U 1380
A U 1381 A MG 1775 A MG 1878 A MG 1928 A A 12 V A
13 V
23 1.36 1.36 239.2 -1.60 -0.66 19.3 82 14 5 3 2 0 0 0  G 406 A G 416 A C 417 A C 418 A C 419 A U 420 A C
422 A A 430 A A 431 A A 432 A C 433 A U 434 A C
435 A A 495 A A 498 A G 500 A C 514 A G 515 A G
538 A A 539 A G 540 A C 995 A A 996 A C 1045 A A
1046 A A 1123 A G 1124 A U 1125 A A 1130 A G 1131
A C 1132 A G 1133 A C 1141 A G 1142 A G 1143 A G
1144 A C 1145 A A 1146 A A 1204 A U 1205 A G 1206
A G 1207 A C 1208 A U 1257 A C 1277 A U 1278 A A
1279 A U 1281 A MG 1613 A MG 1691 A MG 1874 A MG
1924 A MG 316 C
24 1.52 1.47 248.3 -1.25 -0.69 14.8 83 16 3 1 2 1 0 0  C 136 A i:B C 136 A i:A G 406 A G 416 A C 417 A C
418 A C 419 A U 420 A C 422 A A 430 A A 431 A A
432 A C 433 A U 434 A C 435 A A 495 A A 498 A G
500 A C 514 A G 515 A G 538 A A 539 A G 540 A A
949 A C 995 A A 996 A C 1045 A A 1046 A A 1204 A
U 1205 A G 1206 A G 1207 A C 1208 A C 1209 A U
1257 A G 1258 A C 1259 A C 1260 A C 1270 A G 1271
A G 1272 A U 1307 A G 1311 A G 1312 A C 1314 A U
1315 A G 1316 A C 1320 A C 1321 A G 1323 A A 1324
A C 1325 A G 1361 A U 1364 A MG 1613 A MG 1672 A
MG 1691 A MG 316 C
25 1.86 1.86 260.2 -0.59 -0.73 6.4 86 7 1 3 3 2 0 0  C 136 A i:B A 665 A U 669 A G 670 A G 671 A U 672
A G 713 A G 714 A A 715 A A 716 A C 717 A U 723 A
C 732 A A 733 A C 738 A C 805 A C 806 A G 818 A A
819 A G 855 A C 856 A C 857 A C 866 A G 867 A C
868 A A 919 A U 920 A U 921 A G 922 A A 923 A C
924 A A 949 A U 950 A G 951 A U 952 A G 953 A G
954 A U 955 A U 961 A C 962 A G 963 A A 964 A A
965 A G 966 A C 967 A A 974 A A 977 A U 1194 A C
1195 A U 1196 A G 1197 A G 1198 A C 1223 A G 1224
A U 1307 A G 1311 A G 1312 A C 1320 A C 1321 A G
1323 A A 1324 A C 1325 A A 1363 A G 1386 A G 1387
A C 1388 A C 1389 A U 1390 A U 1391 A G 1392 A U
1393 A C 1399 A C 1400 A G 1525 A G 1526 A C 1527
A U 1528 A G 1529 A A 1531 A MG 1672 A MG 1698 A
MG 1828 A MG 1845 A MG 1853 A MG 1884 A MG 1898 A
MG 1921 A
26 1.72 1.72 273.9 -0.71 -0.77 6.6 84 4 0 2 0 0 1 0  A 26 A G 27 A G 28 A G 29 A U 30 A A 32 A A 33 A
C 34 A G 35 A C 36 A G 38 A G 52 A A 53 A C 54 A
A 55 A U 56 A G 57 A C 58 A A 59 A G 61 A C 99 A
A 101 A C 339 A U 340 A C 341 A A 349 A G 350 A G
351 A A 356 A G 357 A U 358 A U 359 A U 365 A C
366 A U 367 A U 368 A C 369 A C 370 A G 371 A C
372 A C 386 A U 387 A G 388 A C 395 A G 396 A C
398 A G 399 A G 406 A G 428 A A 430 A A 431 A A
432 A C 433 A U 434 A C 435 A MG 441 A MG 460 A
MG 473 A A 495 A A 498 A G 500 A C 501 A G 502 A
C 503 A C 504 A C 508 A A 509 A C 522 A A 523 A G
524 A C 536 A G 537 A G 540 A G 541 A G 542 A C
549 A G 550 A U 551 A MG 1593 A MG 1595 A MG 1613
A MG 1646 A MG 1653 A MG 1680 A MG 1691 A MG 1714
A MG 1785 A MG 1790 A MG 1903 A MG 1914 A
27 1.69 1.69 261.9 -0.60 -0.77 6.3 80 4 1 0 1 1 0 0  U 12 A U 13 A U 14 A G 406 A G 416 A C 417 A C
418 A C 419 A U 420 A C 422 A A 430 A A 431 A A
432 A C 433 A U 434 A C 435 A A 495 A A 498 A G
500 A G 505 A G 506 A U 512 A C 513 A C 514 A G
515 A C 526 A G 527 A A 532 A U 534 A G 538 A A
539 A G 540 A A 572 A U 723 A G 724 A G 727 A A
729 A G 731 A G 818 A A 819 A C 822 A G 823 A C
824 A G 825 A C 826 A U 827 A G 851 A G 852 A G
853 A G 854 A G 855 A C 856 A C 857 A C 866 A G
867 A C 868 A U 870 A U 871 A A 872 A G 886 A G
887 A A 915 A G 916 A G 917 A A 918 A A 919 A G
1207 A C 1208 A C 1209 A G 1392 A U 1393 A A 1394
A A 1396 A C 1403 A C 1404 A C 1490 A G 1491 A U
1510 A U 1528 A G 1529 A G 1530 A MG 1613 A MG
1691 A MG 1707 A MG 1786 A MG 1833 A MG 1853 A A
22 V A 23 V
28 1.61 1.58 267.6 -1.24 -0.66 14.9 83 24 4 2 5 2 0 0  U 5 A G 6 A G 7 A A 8 A G 9 A A 10 A G 11 A A 26
A C 136 A i:B C 136 A i:A MG 205 A G 297 A A 298
A G 299 A U 420 A C 422 A G 506 A C 507 A C 508 A
U 512 A C 513 A C 514 A A 532 A U 534 A G 557 A A
611 A C 612 A G 630 A A 949 A C 995 A A 996 A C
1045 A A 1046 A A 1204 A U 1205 A G 1206 A G 1207
A C 1208 A U 1257 A G 1258 A C 1259 A C 1260 A C
1270 A G 1271 A G 1272 A U 1307 A G 1311 A G 1312
A C 1314 A U 1315 A G 1316 A C 1320 A C 1321 A G
1323 A A 1324 A C 1325 A G 1361 A U 1364 A MG
1612 A MG 1660 A MG 1672 A MG 316 C
29 1.71 1.75 278.8 -0.59 -0.77 5.5 80 3 0 1 0 0 1 0  A 26 A G 27 A G 28 A G 29 A U 30 A A 32 A A 33 A
C 34 A G 35 A C 36 A G 38 A C 54 A A 55 A U 56 A
G 57 A C 58 A A 59 A G 61 A U 62 A C 63 A G 64 A
G 69 A C 74 A C 75 A G 76 A C 77 A U 89 A C 90 A
U 93 A G 95 A G 96 A U 97 A C 99 A A 101 A A 356
A G 357 A U 358 A U 359 A A 360 A U 365 A C 366 A
U 367 A U 368 A C 369 A C 370 A G 371 A C 386 A U
387 A G 388 A A 393 A G 394 A C 395 A G 396 A C
398 A G 399 A G 406 A G 428 A A 430 A A 431 A A
432 A C 433 A U 434 A C 435 A MG 441 A MG 460 A
MG 473 A A 495 A A 498 A G 500 A C 501 A G 502 A
C 503 A C 504 A C 508 A A 509 A C 522 A A 523 A G
524 A C 536 A G 537 A G 540 A G 541 A G 542 A C
549 A G 550 A U 551 A MG 1593 A MG 1595 A MG 1613
A MG 1646 A MG 1652 A MG 1653 A MG 1680 A MG 1691
A MG 1696 A MG 1714 A MG 1723 A MG 1742 A MG 1785
A MG 1790 A MG 1806 A MG 1903 A MG 1914 A
30 1.81 1.82 308.6 -1.20 -0.66 12.9 78 15 6 5 2 3 1 0  A 665 A U 669 A G 670 A G 671 A U 672 A G 713 A G
714 A A 715 A A 716 A C 717 A U 723 A C 732 A A
733 A C 738 A C 805 A C 806 A G 818 A A 819 A G
855 A C 856 A C 857 A G 858 A A 859 A A 860 A G
861 A U 863 A C 866 A G 867 A C 868 A A 919 A U
920 A G 1072 A U 1073 A C 1076 A G 1077 A U 1078
A G 1082 A G 1104 A A 1105 A G 1106 A A 1110 A A
1111 A C 1112 A C 1113 A C 1114 A C 1115 A C 1116
A G 1117 A C 1118 A C 1119 A G 1120 A A 1130 A G
1131 A C 1132 A G 1133 A A 1146 A C 1147 A U 1148
A C 1149 A U 1150 A A 1151 A C 1153 A G 1154 A G
1155 A G 1156 A C 1158 A U 1391 A G 1392 A G 1525
A G 1526 A C 1527 A U 1528 A G 1529 A A 1531 A MG
1683 A MG 1835 A MG 1845 A MG 1853 A MG 1921 A MG
1928 A
31 2.33 2.33 28.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 4 Z G 5 Z G 6 Z G 7 Z C 17 Z U 47 Z C 48 Z G 49
Z U 50 Z C 51 Z G 52 Z G 53 Z A 57 Z A 58 Z A 59
Z U 60 Z C 61 Z C 62 Z G 63 Z MG 77 Z MG 78 Z MG
80 Z MG 264 Z MG 426 Z

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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