PDBsum entry 3d4c Go to PDB code:  Tunnel analysis for: 3d4c calculated with MOLE 2.0 PDB id 3d4c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 2.29 17.9 -0.77 0.05 14.9 58 0 1 0 1 5 1 0   2 1.54 2.29 17.9 -0.63 0.18 13.4 58 0 1 0 1 5 1 0   3 1.22 1.22 17.8 0.80 0.12 5.4 79 1 1 2 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.