PDBsum entry 3d3e Go to PDB code:  Pore analysis for: 3d3e calculated with MOLE 2.0 PDB id 3d3e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 5.10 8.30 33.4 -2.66 -0.51 20.8 77 3 2 5 3 1 1 0   2 1.65 1.64 42.6 0.58 0.31 5.5 79 2 1 2 8 4 0 0  NAP 1 A D3E 293 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.