PDBsum entry 3d3c Go to PDB code:  Pore analysis for: 3d3c calculated with MOLE 2.0 PDB id 3d3c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 39.0 -2.28 -0.68 32.5 84 6 6 1 2 0 0 0   2 1.28 1.45 63.2 -2.16 -0.64 21.3 83 4 6 6 4 0 0 0   3 1.20 1.20 93.9 -2.47 -0.76 21.7 83 8 8 6 1 0 1 0   4 1.21 1.21 103.2 -2.73 -0.60 31.0 79 12 8 4 2 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.