spacer
spacer

PDBsum entry 3d2h

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 3d2h calculated with MOLE 2.0 PDB id
3d2h
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 2.92 31.0 -0.72 -0.07 15.1 82 2 1 3 3 2 1 0  
2 1.43 1.69 42.9 -1.34 -0.22 13.6 66 4 2 5 3 6 1 1  FAD 600 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer