PDBsum entry 3d19 Go to PDB code:  Pore analysis for: 3d19 calculated with MOLE 2.0 PDB id 3d19 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 2.48 31.8 -2.20 -0.30 29.8 75 5 3 1 4 2 0 0   2 1.41 2.53 33.2 -1.55 -0.09 29.5 79 7 5 0 8 3 0 0   3 1.52 1.52 50.4 0.24 -0.10 4.3 68 2 0 3 10 0 4 3   4 1.12 2.75 61.1 -2.79 -0.39 38.1 74 9 6 1 3 4 0 0   5 1.15 3.54 66.3 -1.56 -0.11 20.0 88 8 8 7 6 2 0 0   6 1.17 3.59 70.0 -1.61 -0.10 21.5 86 9 10 7 9 4 0 0   7 1.21 3.25 88.5 -1.87 -0.22 27.0 85 12 8 6 6 3 0 0   8 1.24 3.72 107.6 0.03 0.02 10.9 83 4 4 9 14 3 2 1   9 1.25 3.22 116.0 -0.27 0.03 11.8 82 4 6 8 17 4 2 2   10 1.20 3.21 116.8 0.20 0.18 11.9 81 4 7 7 18 4 2 2   11 1.44 2.99 125.7 -1.14 -0.19 17.2 84 9 4 12 14 2 2 2   12 1.20 2.61 174.9 0.64 0.13 6.2 80 4 3 13 31 5 2 3   13 1.11 2.56 179.1 -0.40 0.06 13.9 81 9 11 12 24 7 2 1   14 1.20 2.56 175.6 -0.58 -0.05 14.0 81 10 7 15 20 5 2 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.