PDBsum entry 3d0x Go to PDB code:  Tunnel analysis for: 3d0x calculated with MOLE 2.0 PDB id 3d0x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 1.37 26.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 G A,9 G A,10 C A,76 C A,77 G A,78 A A,111 G A, 112 G A,113 G A,114 G A,136 C A,137 U A,152 G A 2 1.37 27.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  8 G A,9 G A,10 C A,76 C A,77 G A,78 A A,111 G A, 112 G A,113 G A,114 G A,136 C A,137 U A,152 G A 3 2.52 12.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  25 U A,26 A A,27 G A,28 G A,57 G A,58 G A,59 C A, 60 U A,61 G A 4 2.50 2.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  82 G A,83 A A,84 G A,105 U A,106 U A,108 G A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.