PDBsum entry 3d03 Go to PDB code:  Pore analysis for: 3d03 calculated with MOLE 2.0 PDB id 3d03 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.46 64.5 -1.32 -0.35 23.4 75 8 6 1 6 1 0 1   2 1.23 1.37 65.2 -1.44 -0.37 24.4 75 8 4 2 5 2 1 0   3 1.19 1.18 65.3 -1.58 -0.67 15.0 87 6 6 7 2 0 2 0   4 1.27 1.40 67.6 -1.40 -0.40 22.8 74 9 5 1 5 2 2 0   5 1.39 2.87 74.0 -2.30 -0.80 20.2 87 5 4 7 0 0 2 0   6 1.52 1.52 87.7 -1.55 -0.49 19.6 78 8 5 6 5 2 3 0   7 1.52 3.62 93.3 -1.69 -0.48 25.7 81 13 8 5 10 0 1 0   8 1.71 1.88 92.8 -1.97 -0.30 18.9 77 7 7 8 3 4 7 2   9 1.36 5.11 94.9 -1.82 -0.45 29.2 81 15 8 3 10 0 1 0   10 1.53 3.50 100.3 -1.58 -0.52 21.1 78 11 6 4 5 2 3 0   11 1.37 5.05 105.4 -1.55 -0.45 22.9 79 12 7 4 8 1 1 1   12 1.70 1.99 124.2 -1.55 -0.28 13.9 80 6 6 10 3 5 9 0   13 1.70 1.90 124.2 -1.63 -0.32 14.0 78 7 6 9 3 5 8 1   14 1.40 3.78 130.6 -1.39 -0.30 22.3 80 9 8 7 9 3 3 0   15 1.71 1.86 141.4 -1.90 -0.38 18.1 79 8 9 9 5 4 10 2   16 1.37 4.64 150.5 -1.45 -0.41 20.0 80 10 7 8 10 3 4 0   17 1.31 1.35 157.3 -1.45 -0.41 21.8 79 13 8 5 10 3 3 0   18 1.32 1.44 165.8 -1.58 -0.45 22.5 82 11 10 8 12 1 3 1   19 1.70 1.91 168.5 -1.70 -0.43 15.6 81 10 8 10 5 4 8 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.