PDBsum entry 3csn

Pore analysis for: 3csn calculated with

MOLE 2.0

PDB id

3csn

Pores calculated on whole structure

Pores calculated excluding ligands

View options

MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

10 pores, coloured by radius

10 pores, coloured by radius

10 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.25

2.26

27.0

-1.83

-0.57

21.7

91

3

2

4

1

2

0

0

2

1.26

1.26

36.5

-1.54

-0.58

12.1

85

2

1

5

0

2

1

0

3

1.30

1.44

37.6

-2.22

-0.69

17.9

94

3

2

8

1

1

1

0

4

1.27

1.27

33.6

-1.61

-0.59

14.6

85

2

2

5

0

2

1

0

5

1.31

1.46

33.9

-2.33

-0.66

20.3

93

3

3

8

1

1

1

0

6

1.26

1.26

56.6

-1.85

-0.67

16.8

89

3

2

9

0

2

1

0

7

1.28

1.46

56.9

-2.31

-0.72

20.4

94

4

3

12

1

1

1

0

8

1.16

1.33

64.7

-0.83

-0.33

13.8

84

7

4

4

6

3

2

0

9

1.54

4.43

53.5

-2.56

-0.58

30.4

84

9

6

5

1

1

1

0

10

1.18

1.19

77.6

-1.32

-0.40

11.6

83

3

6

9

4

6

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.