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PDBsum entry 3csl

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Membrane protein/heme binding protein PDB id
3csl
Contents
Protein chains
753 a.a.
163 a.a.
Ligands
HEM ×2
GOL ×7
Waters ×43

References listed in PDB file
Key reference
Title Heme uptake across the outer membrane as revealed by crystal structures of the receptor-Hemophore complex.
Authors S.Krieg, F.Huché, K.Diederichs, N.Izadi-Pruneyre, A.Lecroisey, C.Wandersman, P.Delepelaire, W.Welte.
Ref. Proc Natl Acad Sci U S A, 2009, 106, 1045-1050. [DOI no: 10.1073/pnas.0809406106]
PubMed id 19144921
Abstract
Gram-negative bacteria use specific heme uptake systems, relying on outer membrane receptors and excreted heme-binding proteins (hemophores) to scavenge and actively transport heme. To unravel the unknown molecular details involved, we present 3 structures of the Serratia marcescens receptor HasR in complex with its hemophore HasA. The transfer of heme over a distance of 9 A from its high-affinity site in HasA into a site of lower affinity in HasR is coupled with the exergonic complex formation of the 2 proteins. Upon docking to the receptor, 1 of the 2 axial heme coordinations of the hemophore is initially broken, but the position and orientation of the heme is preserved. Subsequently, steric displacement of heme by a receptor residue ruptures the other axial coordination, leading to heme transfer into the receptor.
Figure 1.
Structure of the ternary complex HasA∼HasR∼heme. HasA (red) and HasR (cork domain beginning with residue Asn-113 in orange; barrel domain beginning at residue Lys-241 in blue) are indicated as a ribbon model. The first 5 strands and the loops L1–L3 of HasR are omitted to allow a view into the barrel interior. The heme is indicated as a wire frame model (green). The extracellular loops 6–11 are labeled. Yellow parts of or near L6, L8, and L9 mark positions of 6 residue deletions that have been found to abolish HasA binding to the receptor.
Figure 4.
Detail of the HasA∼HasR∼heme complex showing a putative heme access channel extending from the external medium between L3 and the bent loop L4 to the receptor heme-binding site. HasA and HasR are indicated as a CPK model in red and blue, respectively, except for the heme-coordinating HasR histidines that are colored yellow. The heme is indicated as a wire frame model in green and the Fe^3+ atom as a red sphere.
PROCHECK
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 Headers

 

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