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PDBsum entry 3cs9

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3cs9 calculated with MOLE 2.0 PDB id
3cs9
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.26 2.83 28.3 -2.19 -0.42 33.0 84 4 4 3 4 1 0 0  
2 2.89 4.51 30.5 -1.18 -0.09 22.6 79 6 4 2 2 1 2 0  
3 1.39 1.52 35.9 0.95 0.32 4.4 73 1 2 1 8 4 0 0  NIL 600 A
4 1.38 1.49 39.3 -0.83 -0.17 21.7 74 5 4 1 6 2 0 0  NIL 600 A
5 1.38 1.50 45.3 -0.62 -0.03 18.9 85 4 3 5 10 3 0 0  NIL 600 A
6 1.38 1.49 45.4 -0.95 -0.08 22.1 80 6 4 3 8 4 0 0  NIL 600 A
7 1.34 1.68 47.6 -0.70 -0.12 19.7 68 5 3 2 7 3 0 0  NIL 600 A
8 1.99 1.99 48.1 -0.05 0.10 16.2 83 3 3 3 10 4 0 0  NIL 600 A
9 2.47 2.48 78.0 -1.70 -0.63 17.3 81 3 7 4 3 2 0 0  
10 3.98 4.14 25.5 -1.21 -0.51 20.3 78 3 4 1 4 0 1 0  
11 2.50 2.63 28.8 -1.99 -0.65 24.4 80 4 5 2 3 0 0 0  
12 1.39 1.44 32.8 1.16 0.38 5.0 73 1 2 1 8 4 0 0  NIL 600 C
13 1.87 1.87 47.7 0.11 0.05 18.8 76 2 5 0 7 4 0 0  NIL 600 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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