PDBsum entry 3cqh Go to PDB code:  Tunnel analysis for: 3cqh calculated with MOLE 2.0 PDB id 3cqh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.29 41.3 0.17 0.04 9.2 78 2 2 4 7 4 2 0  MSE 38 B MSE 74 B 2 1.27 1.27 58.0 -0.06 -0.17 8.5 81 3 2 5 11 4 2 0  MSE 38 B MSE 74 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.