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PDBsum entry 3clz
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Tunnel analysis for: 3clz calculated with  MOLE 2.0
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PDB id
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3clz
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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21 tunnels,
coloured by
tunnel radius
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21 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.11 |
2.11 |
16.6 |
-1.12 |
-0.66 |
4.4 |
92 |
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1 |
0 |
1 |
1 |
0 |
1 |
0 |
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DG 1 I DG 2 I DG 3 I DC 4 I DC 10 J DC 11 J DC 12
J
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2 |
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1.69 |
1.73 |
17.5 |
-0.70 |
-0.69 |
2.5 |
106 |
0 |
0 |
2 |
2 |
0 |
0 |
0 |
DG 1 I DG 2 I DG 3 I DC 4 I DC 5 I DC 11 J DC 12 J
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3 |
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1.54 |
1.56 |
21.1 |
-0.39 |
-0.48 |
2.4 |
96 |
0 |
0 |
2 |
2 |
1 |
0 |
0 |
DG 2 E DG 3 E DC 4 E DC 5 E 5CM 6 E DC 11 F DC 12
F
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4 |
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1.71 |
2.35 |
24.8 |
-1.34 |
-0.39 |
13.1 |
73 |
2 |
2 |
0 |
0 |
2 |
0 |
0 |
5CM 6 E DG 7 E DC 2 F
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5 |
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1.76 |
1.76 |
25.1 |
-1.01 |
-0.31 |
9.7 |
81 |
2 |
1 |
1 |
1 |
2 |
0 |
0 |
5CM 6 E DG 7 E DC 2 F
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6 |
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1.58 |
1.80 |
25.3 |
-0.69 |
-0.52 |
3.5 |
89 |
0 |
1 |
2 |
2 |
2 |
0 |
0 |
DG 1 I DG 2 I DG 3 I DC 4 I DC 5 I 5CM 6 I DC 11
J DC 12 J
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7 |
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1.55 |
1.58 |
25.5 |
-0.57 |
-0.37 |
3.6 |
89 |
0 |
1 |
2 |
2 |
2 |
0 |
0 |
DG 2 E DG 3 E DC 4 E DC 5 E 5CM 6 E DC 11 F DC 12
F
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8 |
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1.65 |
1.80 |
27.6 |
-1.43 |
-0.38 |
14.0 |
73 |
2 |
2 |
0 |
0 |
2 |
0 |
0 |
5CM 6 I DG 7 I DC 2 J DC 3 J DT 4 J
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9 |
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1.56 |
1.56 |
30.3 |
-0.97 |
-0.37 |
10.5 |
83 |
2 |
1 |
1 |
1 |
2 |
0 |
0 |
5CM 6 I DG 7 I DC 2 J DC 3 J DT 4 J
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10 |
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1.22 |
1.38 |
32.0 |
-0.38 |
-0.26 |
8.9 |
90 |
1 |
0 |
1 |
3 |
1 |
1 |
0 |
DC 4 E DC 5 E 5CM 6 E DG 7 F DG 8 F DG 9 F DC 10 F
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11 |
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1.22 |
1.40 |
36.4 |
-0.53 |
-0.21 |
8.7 |
86 |
1 |
1 |
1 |
3 |
2 |
1 |
0 |
DC 4 E DC 5 E 5CM 6 E DG 7 F DG 8 F DG 9 F DC 10 F
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12 |
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1.08 |
1.28 |
37.1 |
-0.56 |
-0.36 |
6.8 |
86 |
1 |
1 |
1 |
3 |
2 |
1 |
0 |
DC 4 I DC 5 I 5CM 6 I DG 7 J DG 8 J DG 9 J DC 10 J
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13 |
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1.29 |
1.88 |
38.1 |
-0.77 |
-0.58 |
7.6 |
85 |
3 |
1 |
1 |
1 |
1 |
1 |
0 |
DC 4 I DC 5 I 5CM 6 I DG 7 I DC 2 J DC 3 J DT 4 J
DC 10 J DC 11 J
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14 |
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1.28 |
1.86 |
40.7 |
-0.80 |
-0.57 |
7.7 |
85 |
3 |
1 |
1 |
1 |
1 |
1 |
0 |
DC 4 I DC 5 I 5CM 6 I DG 7 I DC 2 J DC 3 J DT 4 J
DC 10 J DC 11 J
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15 |
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1.09 |
1.28 |
44.8 |
-0.42 |
-0.34 |
11.1 |
93 |
1 |
1 |
1 |
3 |
0 |
1 |
0 |
DC 4 I DC 5 I DG 7 J DG 8 J DG 9 J DC 10 J
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16 |
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1.66 |
1.81 |
21.8 |
-1.31 |
-0.39 |
12.6 |
73 |
2 |
2 |
0 |
0 |
2 |
0 |
0 |
5CM 6 K DG 7 K DC 2 L
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17 |
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1.55 |
1.56 |
26.2 |
-0.51 |
-0.43 |
3.4 |
89 |
0 |
1 |
2 |
2 |
2 |
0 |
0 |
DG 2 K DG 3 K DC 4 K DC 5 K 5CM 6 K DC 12 L
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18 |
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1.37 |
1.46 |
40.3 |
-0.30 |
-0.26 |
7.5 |
85 |
1 |
2 |
1 |
3 |
2 |
1 |
0 |
DC 4 K DC 5 K 5CM 6 K DG 7 L DG 8 L DG 9 L DC 10
L DC 11 L
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19 |
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1.51 |
1.56 |
21.0 |
-0.30 |
-0.54 |
2.3 |
96 |
0 |
0 |
2 |
2 |
1 |
0 |
0 |
DG 1 G DG 2 G DG 3 G DC 4 G DC 5 G 5CM 6 G DC 12 H
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20 |
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1.79 |
1.79 |
21.2 |
-1.10 |
-0.38 |
11.2 |
81 |
2 |
1 |
1 |
1 |
2 |
0 |
0 |
5CM 6 G DG 7 G DC 2 H
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21 |
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1.34 |
1.34 |
31.2 |
-0.10 |
-0.35 |
5.3 |
90 |
1 |
0 |
1 |
3 |
1 |
1 |
0 |
DC 4 G DC 5 G 5CM 6 G DG 7 H DG 8 H DG 9 H DC 10 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program