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PDBsum entry 3cj8
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Pore analysis for: 3cj8 calculated with  MOLE 2.0
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PDB id
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3cj8
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.26 |
3.26 |
29.2 |
-1.47 |
-0.57 |
29.1 |
71 |
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0 |
6 |
0 |
3 |
2 |
1 |
0 |
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FMT 312 B
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2 |
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3.35 |
3.36 |
29.5 |
-1.31 |
-0.49 |
28.4 |
71 |
0 |
6 |
0 |
3 |
2 |
1 |
0 |
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3 |
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1.19 |
1.55 |
31.2 |
-1.36 |
-0.24 |
23.7 |
83 |
3 |
3 |
2 |
3 |
1 |
1 |
0 |
MSE 110 A MSE 111 A MSE 126 A MSE 129 A CL 306 C
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4 |
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1.16 |
1.50 |
36.8 |
-1.10 |
-0.16 |
22.6 |
83 |
3 |
3 |
2 |
5 |
1 |
2 |
0 |
CL 307 A MSE 110 B MSE 111 B MSE 126 B MSE 129 B
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5 |
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1.16 |
1.16 |
41.4 |
-1.01 |
-0.12 |
23.0 |
85 |
3 |
4 |
2 |
5 |
1 |
1 |
0 |
CL 302 B CL 305 B MSE 110 C MSE 111 C MSE 126 C
MSE 129 C
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6 |
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1.19 |
1.55 |
50.8 |
-1.61 |
-0.45 |
28.6 |
79 |
3 |
8 |
2 |
4 |
2 |
1 |
0 |
MSE 110 A MSE 111 A MSE 126 A MSE 129 A FMT 312 B
CL 306 C
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7 |
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2.62 |
2.92 |
79.9 |
-2.02 |
-0.65 |
32.2 |
75 |
3 |
11 |
1 |
5 |
2 |
1 |
0 |
FMT 312 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program