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PDBsum entry 3ccc

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ccc calculated with MOLE 2.0 PDB id
3ccc
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.93 4.08 30.7 -1.90 -0.71 21.7 86 2 5 3 1 1 0 0  
2 1.57 1.84 40.4 -1.08 -0.20 16.8 81 4 2 4 3 2 1 0  
3 1.56 1.84 47.7 -1.19 -0.34 16.1 80 5 3 4 2 2 1 0  
4 1.62 1.75 53.4 -1.58 -0.03 20.5 73 6 2 2 3 6 1 0  7AC 800 A
5 1.25 1.24 57.4 -1.24 -0.45 16.3 84 5 5 5 6 4 2 0  
6 1.60 1.85 69.8 -1.62 -0.19 20.4 77 8 4 5 3 7 1 0  7AC 800 C
7 1.22 1.22 73.2 -1.56 -0.28 18.6 84 9 5 6 5 7 0 0  7AC 800 D
8 1.79 3.85 73.7 -1.88 -0.19 21.1 74 8 5 5 3 9 3 0  7AC 800 D
9 1.52 1.52 111.4 -1.22 -0.35 12.6 78 5 3 5 4 6 1 0  NAG 802 A
10 1.21 1.21 202.9 -1.38 -0.29 14.7 81 14 10 11 8 13 2 0  7AC 800 D NAG 801 D NAG 2 G
11 1.10 3.84 25.1 0.69 0.44 12.0 76 1 2 0 5 3 0 0  
12 1.10 3.83 26.3 1.75 0.66 5.0 76 1 2 0 5 3 0 0  
13 1.40 1.40 27.0 -0.38 -0.60 2.5 86 0 0 2 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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