 |
PDBsum entry 3ccc
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3ccc calculated with MOLE 2.0
|
PDB id
|
|
|
|
3ccc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
13 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.93 |
4.08 |
30.7 |
-1.90 |
-0.71 |
21.7 |
86 |
 |
2 |
5 |
3 |
1 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.57 |
1.84 |
40.4 |
-1.08 |
-0.20 |
16.8 |
81 |
4 |
2 |
4 |
3 |
2 |
1 |
0 |
|
 |
3 |
 |
1.56 |
1.84 |
47.7 |
-1.19 |
-0.34 |
16.1 |
80 |
5 |
3 |
4 |
2 |
2 |
1 |
0 |
|
 |
4 |
 |
1.62 |
1.75 |
53.4 |
-1.58 |
-0.03 |
20.5 |
73 |
6 |
2 |
2 |
3 |
6 |
1 |
0 |
7AC 800 A
|
 |
5 |
 |
1.25 |
1.24 |
57.4 |
-1.24 |
-0.45 |
16.3 |
84 |
5 |
5 |
5 |
6 |
4 |
2 |
0 |
|
 |
6 |
 |
1.60 |
1.85 |
69.8 |
-1.62 |
-0.19 |
20.4 |
77 |
8 |
4 |
5 |
3 |
7 |
1 |
0 |
7AC 800 C
|
 |
7 |
 |
1.22 |
1.22 |
73.2 |
-1.56 |
-0.28 |
18.6 |
84 |
9 |
5 |
6 |
5 |
7 |
0 |
0 |
7AC 800 D
|
 |
8 |
 |
1.79 |
3.85 |
73.7 |
-1.88 |
-0.19 |
21.1 |
74 |
8 |
5 |
5 |
3 |
9 |
3 |
0 |
7AC 800 D
|
 |
9 |
 |
1.52 |
1.52 |
111.4 |
-1.22 |
-0.35 |
12.6 |
78 |
5 |
3 |
5 |
4 |
6 |
1 |
0 |
NAG 802 A
|
 |
10 |
 |
1.21 |
1.21 |
202.9 |
-1.38 |
-0.29 |
14.7 |
81 |
14 |
10 |
11 |
8 |
13 |
2 |
0 |
7AC 800 D NAG 801 D NAG 2 G
|
 |
11 |
 |
1.10 |
3.84 |
25.1 |
0.69 |
0.44 |
12.0 |
76 |
1 |
2 |
0 |
5 |
3 |
0 |
0 |
|
 |
12 |
 |
1.10 |
3.83 |
26.3 |
1.75 |
0.66 |
5.0 |
76 |
1 |
2 |
0 |
5 |
3 |
0 |
0 |
|
 |
13 |
 |
1.40 |
1.40 |
27.0 |
-0.38 |
-0.60 |
2.5 |
86 |
0 |
0 |
2 |
2 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |