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PDBsum entry 3cc2
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Tunnel analysis for: 3cc2 calculated with  MOLE 2.0
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PDB id
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3cc2
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.39 |
220.6 |
-0.67 |
-0.75 |
5.7 |
85 |
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5 |
2 |
4 |
2 |
0 |
2 |
0 |
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A 788 0 C 789 0 A 790 0 A 791 0 U 825 0 A 827 0 G
828 0 C 848 0 U 850 0 C 851 0 G 1378 0 A 1379 0 A
1406 0 A 1407 0 U 1408 0 U 1539 0 G 1540 0 G 1541
0 G 1542 0 A 1581 0 U 1639 0 C 1640 0 A 1641 0 A
1642 0 A 1682 0 G 1694 0 G 1695 0 U 1696 0 G 1697
0 U 1698 0 C 1699 0 C 1700 0 A 1701 0 A 1710 0 A
1712 0 G 1713 0 A 1732 0 A 1733 0 C 1734 0 U 1749
0 C 1750 0 G 1751 0 C 1753 0 A 1754 0 G 1756 0 U
1757 0 U 1758 0 A 1759 0 G 1795 0 U 1817 0 C 1818
0 G 1820 0 A 1997 0 A 2022 0 A 2024 0 G 2025 0 A
2089 0 G 2090 0 G 2091 0 U 2545 0 U 2546 0 G 2584
0 G 2585 0 U 2586 0 OMU 2587 0 OMG 2588 0 U 2589
0 U 2590 0 G 2592 0 G 2617 0 C 2641 0 G 2642 0 G
2656 0 G 2657 0 A 2840 0 MG 8030 0 MG 8083 0 MG
8085 0 NA 8381 0 CL 8519 B MG 8069 K
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2 |
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1.18 |
1.37 |
229.6 |
-1.25 |
-0.67 |
12.7 |
82 |
13 |
3 |
8 |
4 |
0 |
2 |
0 |
A 466 0 G 467 0 A 476 0 A 495 0 G 496 0 A 498 0 G
499 0 G 514 0 U 845 0 A 1390 0 G 1391 0 A 1427 0
C 1428 0 A 1434 0 A 1732 0 A 1733 0 C 1734 0 U
1749 0 C 1750 0 G 1751 0 A 1997 0 A 2089 0 G 2090
0 G 2091 0 G 2099 0 A 2100 0 G 2102 0 A 2103 0 A
2486 0 C 2487 0 G 2540 0 U 2541 0 C 2542 0 U 2545
0 U 2546 0 G 2584 0 G 2585 0 U 2586 0 OMU 2587 0
OMG 2588 0 U 2589 0 U 2590 0 G 2592 0 G 2617 0 G
2618 0 UR3 2619 0 U 2620 0 A 2637 0 G 2639 0 U
2640 0 C 2644 0 U 2645 0 G 2646 0 G 2656 0 G 2657
0 A 2840 0 MG 8030 0 NA 8381 0 CL 8519 B MG 8069 K
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3 |
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1.20 |
1.37 |
26.2 |
0.81 |
0.06 |
6.1 |
82 |
1 |
0 |
0 |
5 |
1 |
1 |
0 |
U 1164 0 G 1165 0 A 1166 0 G 1167 0
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4 |
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1.28 |
1.28 |
23.2 |
0.03 |
0.03 |
13.3 |
83 |
3 |
1 |
0 |
5 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program