 |
PDBsum entry 3bz2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3bz2 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3bz2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
5 tunnels,
coloured by
tunnel radius
|
5 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.20 |
1.19 |
56.7 |
-0.41 |
-0.10 |
11.9 |
72 |
|
2 |
4 |
3 |
8 |
4 |
2 |
1 |
|
OEC 368 A DGD 370 A CL 376 A DGD 489 C
|
 |
|
2 |
 |
1.18 |
1.28 |
62.3 |
-1.77 |
-0.45 |
28.6 |
78 |
7 |
8 |
1 |
7 |
1 |
0 |
0 |
OEC 368 A CL 376 A
|
|
3 |
 |
1.23 |
1.30 |
68.2 |
-0.95 |
-0.29 |
16.9 |
79 |
5 |
9 |
5 |
7 |
3 |
1 |
0 |
OEC 368 A CL 376 A DGD 489 C
|
|
4 |
 |
1.28 |
1.36 |
71.5 |
-0.83 |
-0.25 |
19.9 |
81 |
8 |
8 |
3 |
10 |
2 |
0 |
0 |
OEC 368 A CL 376 A DGD 490 C DGD 491 C LMG 492 C
BCR 115 J
|
 |
5 |
 |
2.00 |
2.57 |
16.1 |
-0.92 |
-0.60 |
10.6 |
96 |
0 |
1 |
3 |
3 |
0 |
0 |
0 |
LMT 226 M LMT 227 T
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program