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PDBsum entry 3bit

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3bit calculated with MOLE 2.0 PDB id
3bit
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 1.78 31.3 -1.72 -0.52 14.3 84 2 2 4 1 1 1 0  
2 1.83 2.02 35.5 -3.14 -0.53 36.1 82 6 4 3 1 1 0 0  
3 2.05 3.14 43.5 -1.94 -0.29 23.6 83 5 4 6 5 1 0 0  
4 1.53 1.53 64.7 -1.80 -0.31 19.2 80 7 4 10 4 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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