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PDBsum entry 3bcc
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Pore analysis for: 3bcc calculated with  MOLE 2.0
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PDB id
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3bcc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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24 pores,
coloured by radius |
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25 pores,
coloured by radius
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25 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.97 |
3.21 |
31.3 |
-0.62 |
-0.14 |
12.2 |
80 |
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4 |
0 |
3 |
3 |
1 |
3 |
0 |
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HEM 242 D
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2 |
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1.27 |
1.27 |
32.1 |
2.61 |
0.65 |
0.8 |
75 |
0 |
0 |
0 |
12 |
1 |
0 |
0 |
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3 |
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1.14 |
1.18 |
35.2 |
-1.29 |
-0.21 |
27.1 |
76 |
7 |
2 |
0 |
3 |
1 |
0 |
0 |
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4 |
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2.33 |
3.14 |
36.4 |
1.62 |
0.50 |
4.1 |
81 |
1 |
1 |
3 |
14 |
2 |
0 |
0 |
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5 |
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2.02 |
2.24 |
45.2 |
-0.36 |
-0.12 |
9.1 |
80 |
4 |
0 |
4 |
5 |
1 |
4 |
1 |
HEM 242 D
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6 |
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1.89 |
2.78 |
49.2 |
-1.12 |
-0.02 |
17.5 |
76 |
5 |
3 |
2 |
5 |
2 |
4 |
1 |
HEM 242 D
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7 |
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1.63 |
2.51 |
49.8 |
-0.88 |
-0.07 |
7.6 |
84 |
1 |
1 |
8 |
6 |
3 |
3 |
0 |
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8 |
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1.28 |
2.39 |
52.0 |
-1.73 |
-0.23 |
18.7 |
79 |
7 |
3 |
6 |
2 |
2 |
2 |
1 |
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9 |
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1.30 |
1.58 |
53.2 |
-1.42 |
-0.25 |
16.4 |
80 |
5 |
2 |
4 |
4 |
3 |
2 |
1 |
HEM 381 C
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10 |
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1.27 |
1.28 |
59.7 |
-0.26 |
0.10 |
13.3 |
74 |
4 |
2 |
3 |
13 |
4 |
0 |
0 |
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11 |
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1.18 |
1.46 |
61.4 |
0.44 |
0.25 |
6.8 |
75 |
3 |
2 |
0 |
12 |
2 |
5 |
0 |
HEM 242 D
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12 |
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2.60 |
4.20 |
61.2 |
-1.42 |
-0.12 |
20.1 |
78 |
7 |
3 |
4 |
3 |
2 |
5 |
0 |
HEM 242 D
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13 |
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1.50 |
1.50 |
72.0 |
-1.02 |
-0.28 |
19.7 |
81 |
8 |
5 |
5 |
7 |
2 |
1 |
0 |
HEM 382 C AMY 384 C
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14 |
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2.11 |
2.21 |
71.6 |
-0.16 |
0.37 |
11.5 |
69 |
8 |
1 |
3 |
7 |
9 |
0 |
1 |
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15 |
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1.33 |
1.47 |
91.8 |
-1.89 |
-0.56 |
23.2 |
88 |
10 |
5 |
4 |
3 |
0 |
2 |
0 |
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16 |
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1.38 |
1.53 |
109.7 |
-1.17 |
-0.37 |
14.3 |
86 |
4 |
10 |
8 |
5 |
4 |
2 |
0 |
UNK 105 I UNK 117 I UNK 120 I UNK 121 I UNK 208 I
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17 |
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1.42 |
1.44 |
114.3 |
-1.26 |
-0.51 |
14.5 |
86 |
4 |
10 |
10 |
3 |
4 |
4 |
0 |
UNK 208 I UNK 209 I
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18 |
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1.57 |
1.73 |
131.3 |
-1.65 |
-0.41 |
21.4 |
87 |
11 |
11 |
9 |
6 |
4 |
0 |
0 |
UNK 105 I UNK 117 I UNK 120 I UNK 121 I UNK 208 I
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19 |
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1.46 |
1.66 |
135.9 |
-1.69 |
-0.56 |
20.7 |
87 |
11 |
11 |
11 |
4 |
4 |
2 |
0 |
UNK 208 I UNK 209 I
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20 |
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1.78 |
4.31 |
144.9 |
-1.73 |
-0.54 |
19.1 |
85 |
8 |
12 |
15 |
8 |
3 |
1 |
0 |
UNK 105 I UNK 117 I UNK 119 I UNK 120 I UNK 121 I
UNK 202 I UNK 208 I
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21 |
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1.83 |
3.14 |
154.3 |
-1.73 |
-0.65 |
18.2 |
86 |
8 |
12 |
18 |
6 |
3 |
2 |
0 |
UNK 117 I UNK 119 I UNK 120 I UNK 202 I UNK 208 I
UNK 209 I
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22 |
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1.27 |
1.41 |
167.6 |
-1.72 |
-0.47 |
18.5 |
83 |
10 |
14 |
14 |
7 |
6 |
3 |
0 |
UNK 202 I UNK 208 I
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23 |
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1.02 |
1.67 |
177.5 |
-1.12 |
-0.26 |
17.9 |
85 |
14 |
13 |
16 |
14 |
7 |
1 |
0 |
UNK 208 I UNK 310 I UNK 311 I
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24 |
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1.58 |
1.75 |
196.1 |
-2.11 |
-0.48 |
25.1 |
84 |
18 |
15 |
15 |
8 |
6 |
1 |
0 |
UNK 202 I UNK 208 I
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25 |
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1.08 |
1.65 |
228.7 |
-0.92 |
-0.24 |
18.2 |
83 |
16 |
14 |
17 |
16 |
5 |
2 |
0 |
UNK 202 I UNK 310 I UNK 311 I
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program