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PDBsum entry 3bbm
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Tunnel analysis for: 3bbm calculated with  MOLE 2.0
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PDB id
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3bbm
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Length
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Hydropathy
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Hydrophobicity
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Polarity
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Mutability
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Residue..type
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Ligands
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Radius |
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1 |
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1.75 |
20.7 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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4 C A,5 A2M A,6 G A,7 U A,5 U B,6 G B,8 G B,9 A B,
26 A B,38 C C,41 U C
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2 |
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1.75 |
25.2 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 U A,2 C A,3 C A,4 C A,5 A2M A,6 G A,7 U A,14 S
O4 A,8 G B,9 A B,10 A B,26 A B,38 C C
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3 |
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1.76 |
31.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
4 C A,5 A2M A,6 G A,7 U A,8 C A,9 C A,2 C B,3 G B,
4 G B,5 U B,7 A B,8 G B,9 A B,26 A B,38 C C
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4 |
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2.59 |
12.8 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
4 C A,17 C B,18 A B,19 G B,20 A B,42 U C,43 A C,
44 C C,45 C C
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5 |
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2.27 |
13.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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13 G B,14 S9L B,15 G B,18 A B,19 G B,20 A B,43 A
C,44 C C,45 C C,46 U C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program