PDBsum entry 3bbk Go to PDB code:  Tunnel analysis for: 3bbk calculated with MOLE 2.0 PDB id 3bbk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 2.30 10.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  22 A B,23 A B,35 G C,36 G C,38 C C,39 C C,40 A C, 103 NCO C 2 2.61 12.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 C A,17 C B,18 A B,19 G B,20 A B,42 U C,43 A C, 44 C C,45 C C 3 2.77 19.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  13 G B,14 S9L B,15 G B,18 A B,19 G B,20 A B,43 A C,44 C C,45 C C,46 U C 4 1.40 22.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 C A,5 A A,4 G B,10 A B,11 G B,38 C C,40 A C,41 U C,42 U C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.