PDBsum entry 3bb6 Go to PDB code:  Tunnel analysis for: 3bb6 calculated with MOLE 2.0 PDB id 3bb6 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.43 20.0 0.85 0.60 9.3 67 1 1 0 3 3 3 0  MSE 106 A ZN 128 D 2 1.24 1.26 36.3 0.02 0.13 15.1 71 4 2 0 5 3 2 0  ZN 128 D 3 1.42 1.43 36.6 0.11 0.33 7.3 72 2 1 2 5 4 6 0  MSE 106 A ZN 128 D 4 1.43 1.44 44.6 -0.29 0.11 18.0 79 5 2 0 7 3 1 0  ZN 128 D 5 1.45 1.43 48.6 0.06 0.19 11.7 78 5 1 1 7 3 5 0  MSE 106 A ZN 128 D 6 1.45 2.33 49.4 -0.52 0.24 19.1 75 5 3 0 7 5 2 0  ZN 128 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.