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PDBsum entry 3b9e

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Tunnel analysis for: 3b9e calculated with MOLE 2.0 PDB id
3b9e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.09 1.09 15.5 -0.33 -0.23 9.2 71 1 1 0 2 2 1 0  
2 1.49 1.62 24.9 -0.90 -0.19 10.2 88 1 1 3 4 1 1 0  
3 1.49 1.63 32.6 -1.28 -0.31 15.3 89 3 1 3 4 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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