PDBsum entry 3b8e Go to PDB code:  Pore analysis for: 3b8e calculated with MOLE 2.0 PDB id 3b8e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.16 2.88 258.8 0.03 0.29 11.1 79 7 12 7 24 12 1 0  PC1 1 B 2 1.04 1.04 83.9 0.93 0.46 4.9 73 1 1 2 16 8 2 0  PC1 1 C 3 1.02 1.02 101.1 -0.33 -0.02 13.7 74 2 3 1 6 4 2 0   4 2.55 3.33 112.2 -0.73 -0.39 14.1 87 4 5 6 6 0 2 0   5 1.32 1.33 125.8 -0.82 0.04 14.8 77 4 4 4 8 7 2 0   6 1.71 1.77 131.3 -0.99 -0.50 13.6 88 6 7 10 7 0 2 0  RB 2005 C 7 1.91 2.04 282.9 -0.34 -0.01 14.5 81 11 10 9 25 8 1 0  PC1 1 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.