PDBsum entry 3b8d Go to PDB code:  Pore analysis for: 3b8d calculated with MOLE 2.0 PDB id 3b8d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.40 1.72 25.3 -1.52 -0.52 19.1 95 5 1 2 0 0 0 0   2 1.13 1.13 44.4 -1.63 -0.16 18.2 78 8 1 3 2 2 2 0  SO4 4001 C 3 0.99 0.99 46.7 -1.49 -0.32 14.7 84 8 0 3 2 1 2 0   4 1.41 1.71 56.2 -0.68 0.04 17.3 86 13 2 2 10 2 2 0   5 1.38 1.42 66.2 -0.96 -0.08 18.1 86 13 3 3 10 2 2 0   6 1.74 1.86 65.7 -1.48 -0.27 17.8 77 10 2 5 6 5 4 0  SO4 4001 C 7 1.06 1.06 80.8 -1.04 0.00 18.2 86 14 2 4 12 2 3 0   8 1.81 3.05 63.5 -2.36 -0.57 29.3 84 9 6 3 0 2 0 0   9 1.54 1.86 32.3 0.47 0.11 10.6 84 2 4 4 6 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.