PDBsum entry 3b8c Go to PDB code:  Pore analysis for: 3b8c calculated with MOLE 2.0 PDB id 3b8c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.52 27.8 1.75 0.41 6.3 76 0 1 0 11 1 0 1   2 1.33 1.55 31.6 0.32 -0.05 14.4 80 2 3 0 9 0 1 0   3 1.29 1.52 35.2 0.60 0.04 12.8 82 2 3 0 11 0 1 0   4 1.28 1.53 64.4 1.52 0.48 5.9 82 0 2 2 15 2 0 1   5 1.32 1.32 76.4 -0.55 -0.29 12.0 90 5 4 6 11 1 2 0   6 1.58 1.73 82.8 -1.25 -0.21 21.2 84 8 5 6 8 2 1 0   7 1.32 1.32 83.0 -2.02 -0.46 20.8 79 5 6 6 1 2 4 0   8 1.35 1.42 92.9 -1.14 -0.40 18.1 81 4 10 4 8 2 4 0  ACP 1003 B MG 1004 B 9 1.33 1.40 101.1 -1.91 -0.45 20.3 80 7 7 6 2 2 4 0   10 1.29 1.25 109.4 -1.00 -0.48 12.9 81 8 7 6 12 2 7 0  ACP 1003 B MG 1004 B 11 1.57 1.72 110.1 0.38 0.14 11.4 86 5 4 4 13 2 0 0   12 1.29 1.42 134.5 -1.13 -0.45 16.8 84 12 7 8 13 1 3 0   13 1.78 1.91 139.6 -1.99 -0.39 25.1 80 12 10 5 4 2 3 0   14 2.75 3.05 144.6 -1.02 -0.01 21.4 80 8 6 5 7 3 2 0   15 1.13 2.52 146.8 -1.29 -0.27 21.5 79 10 7 5 8 2 4 0   16 1.13 1.29 155.0 0.15 0.09 14.7 87 5 5 6 17 4 1 0   17 1.35 1.35 180.6 -0.38 -0.12 12.0 86 6 9 9 18 4 3 1   18 1.30 2.77 180.7 -1.84 -0.24 26.2 78 14 9 9 7 4 6 0   19 1.38 1.38 187.1 -0.33 -0.13 12.5 86 7 9 9 22 4 3 1   20 1.33 1.44 205.5 -0.90 -0.35 15.9 80 12 12 5 16 4 7 0  ACP 1003 B MG 1004 B 21 1.55 2.51 209.0 -0.89 -0.04 18.2 82 10 11 9 14 5 3 1   22 1.19 1.32 224.4 -0.59 -0.27 12.5 84 11 13 8 23 3 4 1   23 1.54 1.57 214.3 0.24 0.18 11.9 84 6 8 7 20 5 1 1   24 1.14 3.14 230.5 -0.94 -0.32 18.5 83 16 12 7 17 3 3 0   25 1.61 2.20 234.7 -0.72 -0.05 16.6 83 13 12 9 20 5 3 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.