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PDBsum entry 3b1d
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Pore analysis for: 3b1d calculated with  MOLE 2.0
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PDB id
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3b1d
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.67 |
1.79 |
27.5 |
-3.20 |
-0.83 |
27.9 |
84 |
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5 |
2 |
7 |
0 |
0 |
0 |
0 |
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2 |
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2.40 |
2.59 |
32.1 |
-2.88 |
-0.80 |
34.6 |
81 |
6 |
6 |
2 |
0 |
0 |
1 |
0 |
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3 |
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2.42 |
2.60 |
34.4 |
-1.45 |
-0.46 |
15.4 |
78 |
3 |
3 |
4 |
1 |
1 |
1 |
1 |
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4 |
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2.40 |
3.05 |
41.1 |
-1.98 |
-0.43 |
26.1 |
79 |
5 |
6 |
0 |
3 |
2 |
1 |
0 |
EPE 603 C EPE 601 D
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5 |
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1.37 |
1.74 |
45.3 |
-1.56 |
-0.44 |
22.1 |
79 |
7 |
5 |
2 |
3 |
2 |
0 |
0 |
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6 |
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1.37 |
1.77 |
46.1 |
-0.84 |
-0.36 |
14.9 |
80 |
5 |
2 |
2 |
5 |
0 |
1 |
0 |
EPE 603 C EPE 601 D
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7 |
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1.37 |
1.75 |
48.4 |
-1.52 |
-0.41 |
19.1 |
75 |
6 |
3 |
3 |
3 |
2 |
1 |
0 |
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8 |
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2.39 |
3.01 |
55.8 |
-1.98 |
-0.39 |
24.9 |
73 |
6 |
6 |
2 |
4 |
3 |
2 |
0 |
EPE 603 C EPE 601 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program