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PDBsum entry 3b05
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Tunnel analysis for: 3b05 calculated with  MOLE 2.0
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PDB id
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3b05
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.91 |
1.91 |
15.1 |
-0.50 |
0.07 |
17.5 |
77 |
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2 |
1 |
1 |
1 |
1 |
0 |
0 |
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2 |
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1.47 |
1.47 |
15.8 |
0.92 |
0.12 |
2.6 |
73 |
1 |
0 |
1 |
5 |
1 |
1 |
0 |
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3 |
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1.20 |
2.75 |
16.0 |
1.35 |
0.38 |
5.3 |
76 |
2 |
0 |
1 |
6 |
1 |
0 |
0 |
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4 |
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1.23 |
2.77 |
17.3 |
1.19 |
0.19 |
2.4 |
77 |
1 |
0 |
1 |
7 |
1 |
1 |
0 |
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5 |
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1.42 |
1.61 |
16.2 |
0.84 |
0.13 |
2.5 |
73 |
1 |
0 |
1 |
5 |
1 |
1 |
0 |
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6 |
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1.11 |
1.11 |
35.0 |
-2.06 |
-0.50 |
19.2 |
88 |
5 |
4 |
6 |
1 |
1 |
0 |
0 |
FNR 669 A IPE 701 A MG 1001 A
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7 |
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1.33 |
2.14 |
34.6 |
-2.34 |
-0.49 |
22.8 |
87 |
6 |
4 |
5 |
2 |
1 |
0 |
0 |
FNR 669 D IPE 701 D MG 1001 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program