 |
PDBsum entry 3azk
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3azk calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3azk
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
12 pores,
coloured by radius |
|
10 pores,
coloured by radius
|
10 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.54 |
1.66 |
27.1 |
-2.09 |
-0.59 |
20.7 |
90 |
|
5 |
0 |
2 |
2 |
0 |
0 |
0 |
|
DG 40 I DG 249 J DA 257 J
|
 |
|
2 |
 |
1.52 |
1.66 |
28.4 |
-1.64 |
-0.68 |
18.2 |
89 |
4 |
0 |
1 |
0 |
0 |
0 |
0 |
DT 38 I DG 39 I DG 40 I DA 175 J DT 250 J DT 251
J DT 252 J DA 257 J
|
|
3 |
 |
1.25 |
1.25 |
28.5 |
-1.21 |
-0.73 |
12.9 |
83 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
DC 129 I DT 130 I DC 132 I DA 133 I DG 164 J DA
165 J DT 166 J DT 167 J DC 168 J DG 240 J DA 241 J
|
|
4 |
 |
1.46 |
1.46 |
30.1 |
-1.53 |
-0.54 |
19.3 |
90 |
3 |
1 |
3 |
2 |
0 |
0 |
0 |
DC 129 I DT 130 I DC 132 I DA 133 I DG 164 J DA
165 J DT 166 J DT 167 J DC 168 J DT 239 J
|
|
5 |
 |
2.12 |
2.12 |
38.1 |
-0.95 |
-0.55 |
9.5 |
82 |
2 |
0 |
2 |
1 |
0 |
0 |
0 |
DC 50 I DA 51 I DT 52 I DG 164 J DA 165 J DT 236
J DT 237 J DT 239 J DG 240 J DA 241 J
|
|
6 |
 |
2.88 |
2.92 |
61.7 |
-2.04 |
-0.67 |
24.4 |
84 |
6 |
3 |
5 |
1 |
1 |
1 |
0 |
DA 28 I DT 37 I DT 38 I DT 104 I DT 105 I DA 113
I DA 175 J DG 185 J DG 186 J DC 195 J DC 260 J
|
|
7 |
 |
2.31 |
3.01 |
64.2 |
-1.91 |
-0.20 |
22.6 |
80 |
8 |
3 |
7 |
3 |
5 |
1 |
0 |
DC 195 J DG 249 J
|
|
8 |
 |
1.78 |
1.91 |
88.7 |
-1.60 |
-0.66 |
15.4 |
81 |
6 |
1 |
3 |
1 |
0 |
2 |
0 |
DG 68 I DC 69 I DT 70 I DC 132 I DA 133 I DA 141
I DT 142 I DT 143 I MN 1003 I DC 156 J DA 157 J
DG 164 J DA 165 J DT 221 J DT 239 J DG 240 J DA
241 J
|
|
9 |
 |
1.77 |
1.91 |
89.4 |
-1.58 |
-0.58 |
16.1 |
76 |
6 |
0 |
1 |
1 |
0 |
2 |
0 |
DA 57 I DG 58 I DG 59 I DG 68 I DC 69 I DT 70 I
DC 132 I DA 133 I DG 134 I DA 141 I DT 142 I DT
143 I MN 1003 I DC 156 J DA 157 J DT 221 J DT 239
J DG 240 J
|
 |
10 |
 |
2.68 |
2.73 |
112.9 |
-0.96 |
-0.43 |
15.0 |
78 |
9 |
2 |
3 |
5 |
1 |
0 |
0 |
DG 18 I DT 70 I DC 79 I DT 80 I DC 89 I DT 90 I
DT 92 I DT 93 I DT 198 J DC 199 J DT 208 J DG 209
J DT 210 J DA 218 J DA 219 J DT 220 J
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program