PDBsum entry 3av2 Go to PDB code:  Pore analysis for: 3av2 calculated with MOLE 2.0 PDB id 3av2 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.59 3.89 27.3 -1.52 -0.72 17.2 86 2 1 3 1 0 1 0  DT 8 I DG 18 I DT 92 I DC 195 J DC 206 J DA 270 J DG 280 J DG 281 J DT 282 J 2 3.87 3.87 27.8 -1.42 -0.82 13.6 79 2 1 1 0 0 0 0  DG 59 I DA 133 I DG 134 I DA 163 J DG 164 J DA 165 J DT 239 J DG 240 J 3 3.75 3.75 37.1 -1.63 -0.71 16.1 89 4 0 4 1 0 1 0  DC 9 I DC 10 I DA 11 I DC 12 I DG 18 I DC 195 J D A 270 J DA 279 J DG 280 J DT 286 J DA 287 J DT 288 J 4 2.87 2.87 39.4 -1.76 -0.64 15.8 78 4 0 1 0 0 1 0  DT 8 I DC 9 I DC 10 I DA 11 I DA 279 J DG 280 J DG 281 J DT 282 J DT 286 J DA 287 J DT 288 J 5 3.05 3.05 40.1 -1.47 -0.65 16.7 89 4 0 3 1 0 0 0  DG 46 I DC 47 I DT 48 I DT 123 I DA 124 I DA 165 J DC 172 J DA 173 J DT 239 J DG 249 J DT 250 J DT 251 J DT 252 J 6 2.56 2.56 43.3 -2.59 -0.64 32.4 78 6 2 0 1 1 0 0  DG 31 I DT 32 I DA 113 I DC 114 I DT 258 J DC 260 J DA 261 J DC 262 J 7 2.80 2.95 43.6 -0.95 -0.50 12.1 82 4 0 3 2 0 1 0  DG 18 I DT 86 I DG 87 I DC 88 I DC 89 I DT 90 I DT 91 I DT 92 I DT 93 I DC 195 J DT 198 J DC 199 J DA 201 J DT 208 J DG 209 J DT 210 J DA 270 J 8 2.64 2.78 46.0 -1.42 -0.58 17.1 90 4 0 4 2 0 0 0  DT 37 I DT 38 I DG 39 I DC 114 I DC 116 I DA 165 J DA 175 J DT 239 J DG 249 J DT 250 J DT 251 J 9 2.09 2.09 48.1 -1.55 -0.55 16.5 87 6 1 3 3 1 0 0  DA 102 I DA 110 I DA 111 I DA 187 J DC 195 J DA 270 J DG 271 J 10 2.57 2.55 53.1 -2.01 -0.49 25.7 77 6 2 3 2 1 1 0  DA 113 I DC 114 I DC 195 J DC 260 J DA 270 J DG 271 J 11 2.72 2.76 57.3 -2.15 -0.50 26.5 85 6 1 3 2 1 0 0  DA 28 I DG 31 I DT 32 I DA 102 I DG 103 I DT 104 I DG 185 J DG 186 J DC 195 J DT 258 J DC 260 J DA 261 J DC 262 J DA 270 J DG 271 J 12 2.84 2.95 77.5 -1.26 -0.62 14.5 82 4 2 5 1 0 0 0  DT 8 I DG 18 I DT 86 I DG 87 I DC 88 I DC 89 I DT 90 I DT 91 I DT 92 I DT 93 I DT 198 J DC 199 J DA 201 J DC 206 J DT 208 J DG 209 J DG 280 J DG 281 J DT 282 J 13 1.90 3.25 88.1 -1.89 -0.30 21.4 79 10 2 8 4 6 1 0  DA 165 J DC 195 J DT 239 J DG 249 J DA 270 J DG 271 J 14 1.92 2.19 91.8 -1.48 -0.21 19.9 82 7 1 5 6 0 1 0  DT 70 I DG 71 I DA 72 I DA 73 I DT 74 I DC 132 I DA 133 I DA 157 J DA 218 J DA 219 J DT 220 J DT 226 J 15 2.86 3.15 112.6 -1.85 -0.55 21.5 75 8 0 1 2 0 2 0  DA 1 I DT 8 I DC 9 I DC 10 I DG 71 I DA 72 I DA 73 I DT 74 I DC 215 J DT 216 J DG 217 J DA 279 J DG 280 J DG 281 J DT 282 J DT 288 J DT 289 J DG 290 J 16 2.71 3.26 116.1 -1.90 -0.36 26.5 84 11 3 6 7 0 1 0  DT 70 I DG 71 I DA 72 I DA 73 I DT 74 I DA 110 I DA 111 I DT 180 J DA 187 J DA 218 J DA 219 J DT 220 J 17 1.98 4.47 134.5 -2.17 -0.30 28.8 80 17 3 6 7 2 0 0  DT 37 I DT 38 I DT 70 I DG 71 I DA 72 I DA 73 I DT 74 I DC 114 I DC 116 I DA 218 J DA 219 J DT 220 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.