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PDBsum entry 3aso

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Pore analysis for: 3aso calculated with MOLE 2.0 PDB id
3aso
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 2.33 30.1 -1.78 -0.36 23.1 74 4 3 1 3 3 2 0  
2 1.46 1.49 36.6 -1.10 -0.53 15.2 82 3 5 2 1 2 2 0  PGV 1524 N
3 1.26 1.49 48.7 -1.48 -0.53 12.4 83 4 2 4 2 2 3 0  PGV 268 C
4 1.29 1.89 49.2 -0.82 -0.10 13.4 76 5 5 4 6 6 2 0  FME 1 B
5 5.21 5.22 49.9 -1.66 -0.57 18.4 82 6 2 3 1 1 2 1  CDL 269 G PGV 1268 P
6 1.28 1.53 51.4 -1.34 -0.43 13.7 83 3 3 3 3 2 2 0  PGV 1268 P
7 4.73 6.13 53.5 -0.42 0.32 9.8 74 1 2 2 6 6 1 0  CDL 269 G PGV 1268 P CHD 1525 P
8 1.24 1.50 74.3 -1.46 -0.55 13.7 82 4 4 4 3 4 2 0  PGV 268 C CDL 269 G PGV 1268 P
9 1.56 1.55 76.5 -1.61 -0.40 18.9 77 5 6 5 2 3 2 1  
10 1.89 2.06 81.1 -1.34 -0.25 15.5 81 6 6 5 9 5 3 0  PEK 265 C CHD 229 G CDL 269 G
11 1.21 1.49 89.3 -1.80 -0.46 19.4 82 4 8 5 4 4 3 0  PGV 268 C CDL 1269 T
12 1.39 1.42 89.9 -1.37 -0.54 19.4 84 8 9 4 3 2 1 1  PGV 1524 N
13 1.42 1.45 94.5 -1.21 -0.40 17.2 85 9 9 4 10 4 2 0  PEK 265 C CHD 229 G CDL 269 G PGV 1524 N
14 1.89 2.17 137.4 -0.20 0.07 9.3 73 6 3 4 15 7 5 0  TPO 11 G CDL 269 G PEK 1263 G PGV 1268 P CHD 1525
P PEK 263 T
15 2.20 4.47 136.8 -0.63 -0.02 13.6 77 8 2 5 12 7 3 1  TPO 11 G CDL 269 G PEK 1263 G PGV 1268 P CHD 1525
P PEK 263 T
16 1.15 3.81 189.9 0.29 0.17 9.2 73 8 7 7 24 12 1 0  TGL 521 A FME 1 B CDL 1269 T
17 1.19 1.20 222.0 0.77 0.38 6.4 74 7 4 11 30 15 2 1  TGL 521 A FME 1 B PGV 268 C CHD 525 C CDL 1269 T
18 1.18 1.08 249.7 0.43 0.27 9.1 75 10 7 12 28 18 2 1  TGL 521 A FME 1 B PGV 268 C CHD 525 C CDL 269 G
PGV 1268 P CDL 1269 T
19 1.16 1.15 291.4 1.10 0.50 6.7 73 7 4 10 48 21 3 1  TGL 521 A FME 1 B PGV 268 C TPO 11 G CDL 269 G P
EK 1263 G PGV 1268 P PEK 263 T PEK 1265 T CDL
1269 T
20 1.22 1.12 315.3 0.85 0.39 7.6 72 13 5 9 48 22 6 1  TGL 521 A FME 1 B PGV 268 C TPO 11 G CDL 269 G P
EK 1263 G PGV 1268 P PEK 263 T PEK 1265 T CDL
1269 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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