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PDBsum entry 3aef
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Pore analysis for: 3aef calculated with  MOLE 2.0
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PDB id
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3aef
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.44 |
2.52 |
27.5 |
2.89 |
0.82 |
0.8 |
76 |
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0 |
0 |
0 |
12 |
2 |
0 |
0 |
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EPH 1306 D
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2 |
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1.76 |
1.76 |
32.4 |
1.78 |
0.27 |
1.3 |
87 |
0 |
0 |
3 |
8 |
1 |
0 |
0 |
HEM 1305 C EPH 1306 D
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3 |
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1.39 |
2.61 |
51.0 |
-0.61 |
0.14 |
22.0 |
78 |
8 |
1 |
1 |
10 |
2 |
0 |
0 |
HEM 1305 C EPH 1306 D
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4 |
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1.40 |
2.44 |
60.6 |
-2.36 |
-0.36 |
25.8 |
80 |
10 |
3 |
4 |
1 |
3 |
1 |
0 |
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5 |
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1.73 |
1.89 |
75.9 |
-1.57 |
-0.09 |
24.0 |
77 |
11 |
2 |
4 |
7 |
4 |
1 |
0 |
HEM 1305 C EPH 1306 D
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6 |
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1.40 |
2.09 |
66.8 |
-1.29 |
-0.04 |
23.4 |
77 |
11 |
6 |
5 |
4 |
7 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program