PDBsum entry 3ae7 Go to PDB code:  Tunnel analysis for: 3ae7 calculated with MOLE 2.0 PDB id 3ae7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.66 85.0 -0.82 -0.21 16.4 82 8 4 4 9 6 1 0  FAD 700 A 2 1.24 2.25 93.2 -0.96 -0.20 19.3 83 12 7 5 9 6 0 0  FAD 700 A 3 1.20 1.20 20.8 -1.97 -0.57 21.5 86 1 2 3 3 1 0 0   4 1.19 1.19 30.1 -1.72 -0.51 13.5 78 2 2 4 4 2 0 0   5 1.20 1.20 33.3 -1.88 -0.52 17.4 79 3 2 4 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.