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PDBsum entry 3ae3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ae3 calculated with MOLE 2.0 PDB id
3ae3
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.76 1.79 47.7 -0.86 -0.03 18.5 79 7 1 3 8 2 1 0  HEM 1305 C
2 1.73 1.73 49.2 -1.89 -0.28 21.5 77 9 2 3 3 3 1 0  HEM 1305 C
3 1.77 2.63 50.7 -1.72 -0.17 22.4 76 8 2 3 4 3 1 0  HEM 1305 C
4 2.35 3.30 50.9 3.18 0.94 0.6 78 0 0 0 14 1 0 0  EPH 1306 D
5 2.36 3.30 59.4 3.24 0.97 0.5 74 0 0 0 16 2 0 0  EPH 1306 D
6 1.30 3.11 72.6 -1.22 -0.08 21.2 77 10 4 5 4 8 2 0  
7 1.25 1.40 112.2 -1.55 -0.11 21.7 82 12 2 6 8 3 1 0  HEM 1305 C
8 1.26 1.39 110.8 -2.06 -0.13 23.2 79 13 2 5 4 5 2 0  HEM 1305 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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