PDBsum entry 3abk Go to PDB code:  Pore analysis for: 3abk calculated with MOLE 2.0 PDB id 3abk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 5.45 5.54 33.6 -1.54 -0.64 15.6 81 5 2 3 0 0 3 1  PGV 1268 U 2 4.70 6.15 34.9 -0.43 0.20 5.2 70 1 1 2 4 5 2 0  PGV 268 C CHD 525 C CDL 1269 T 3 1.27 1.58 42.3 -1.12 0.13 21.7 79 7 1 1 4 2 1 0   4 1.83 2.00 43.6 -0.90 -0.44 9.3 91 2 2 7 3 1 2 0  CDL 1269 T 5 2.32 2.48 43.9 -0.82 -0.21 19.1 74 6 4 0 4 2 1 0  PGV 524 A TGL 523 D 6 1.21 1.43 48.1 -1.85 -0.55 15.9 82 2 4 4 2 3 2 0  CDL 269 G PGV 1268 U 7 1.29 1.60 56.7 -2.41 -0.33 25.6 77 10 3 4 2 2 2 1  PGV 1268 U 8 1.27 1.43 74.0 -0.19 -0.04 7.9 73 3 4 4 7 10 3 1  TGL 522 L 9 1.23 1.41 85.0 -1.23 -0.40 14.6 86 2 8 6 3 3 2 0  PGV 1268 U 10 2.12 2.50 93.6 0.21 0.29 11.7 77 3 4 4 12 5 1 0  CDL 269 G PEK 1263 G CHD 1525 P PGV 1268 U 11 2.51 3.52 104.6 -0.42 0.01 11.7 76 5 5 6 13 9 3 1  CHD 1085 B PGV 268 C PEK 1265 T CDL 1269 T 12 1.42 1.67 119.0 0.14 0.16 18.4 83 6 6 2 14 2 0 1  PSC 1229 R 13 1.23 1.29 145.7 -0.14 0.13 11.7 72 8 4 5 18 12 3 0  PGV 524 A TGL 523 D DMU 526 M 14 1.28 1.27 144.6 0.35 0.20 8.2 72 6 3 5 20 10 3 0  PGV 524 A DMU 526 M 15 1.51 1.76 156.1 0.28 0.32 13.2 80 6 8 8 24 8 3 1  PEK 265 C CDL 269 G CHD 229 O CHD 1525 P PSC 1229 R PGV 1268 U 16 1.57 1.83 157.8 0.29 0.24 14.4 84 8 8 5 29 5 1 0  PEK 265 C CDL 269 G CHD 229 O PSC 1229 R 17 1.28 1.85 205.2 0.10 0.09 9.2 77 8 5 8 24 11 3 1  CDL 269 G PEK 1263 G CHD 1525 P PGV 1268 U 18 1.23 1.31 38.9 0.97 0.41 6.7 70 1 2 2 13 5 0 0  DMU 1526 Z 19 1.30 2.56 41.8 -0.73 -0.10 11.0 79 3 3 4 6 3 3 0  FME 1 O Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.