spacer
spacer

PDBsum entry 3a6e

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3a6e calculated with MOLE 2.0 PDB id
3a6e
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.53 28.4 -0.99 -0.17 14.7 78 4 2 4 2 2 3 0  
2 1.12 1.28 56.6 -1.41 -0.20 21.3 75 5 5 5 3 6 2 0  
3 1.23 1.35 72.4 -1.57 -0.20 21.7 83 7 8 10 3 5 1 0  
4 1.20 1.34 82.8 -1.26 -0.33 19.5 84 5 5 6 5 2 3 0  
5 1.32 1.37 95.1 -1.13 -0.34 18.1 78 5 6 5 4 5 4 0  
6 1.32 1.46 79.8 -1.29 -0.32 21.2 79 5 6 7 3 6 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer