PDBsum entry 3a5t Go to PDB code:  Pore analysis for: 3a5t calculated with MOLE 2.0 PDB id 3a5t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.20 29.3 -0.63 -0.32 9.6 81 2 0 2 1 0 0 1  DT 5 C DG 6 C DC 8 D DT 9 D DC 10 D DA 11 D DT 12 D 2 1.14 1.20 39.0 -0.63 -0.25 16.4 88 2 0 1 4 0 0 1  DT 5 C DG 6 C DG 6 D DA 7 D DC 8 D DT 9 D DC 10 D DA 11 D DT 12 D 3 1.55 1.65 40.8 -2.06 -0.33 30.1 88 5 0 0 4 0 0 0  DT 5 C DG 6 C DA 7 C DG 6 D DA 7 D DC 8 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.