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PDBsum entry 3a4x
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Tunnel analysis for: 3a4x calculated with  MOLE 2.0
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PDB id
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3a4x
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.52 |
1.51 |
32.1 |
-0.59 |
-0.52 |
12.1 |
86 |
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2 |
2 |
4 |
2 |
2 |
1 |
0 |
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GOL 720 A GOL 721 B NAG 4 D
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2 |
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1.43 |
1.67 |
32.2 |
-0.07 |
-0.49 |
5.8 |
88 |
0 |
1 |
5 |
2 |
2 |
1 |
0 |
GOL 720 A GOL 721 B NAG 4 D
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3 |
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1.18 |
1.34 |
34.6 |
0.02 |
-0.26 |
8.1 |
85 |
1 |
2 |
4 |
4 |
3 |
1 |
0 |
GOL 720 A GOL 721 B NAG 4 D
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4 |
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1.52 |
1.52 |
37.0 |
-0.46 |
-0.12 |
13.5 |
72 |
0 |
4 |
1 |
4 |
4 |
3 |
0 |
NDG 1 D NAG 2 D NAG 3 D NAG 4 D
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5 |
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1.52 |
1.52 |
37.3 |
-0.23 |
-0.15 |
13.4 |
72 |
0 |
4 |
1 |
4 |
4 |
3 |
0 |
NDG 1 D NAG 2 D NAG 3 D NAG 4 D
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6 |
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1.52 |
1.52 |
37.6 |
-0.46 |
-0.22 |
14.9 |
81 |
0 |
7 |
2 |
6 |
3 |
3 |
0 |
NDG 1 C NAG 2 C NAG 4 C NAG 4 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program